Mariprofundus aestuarium: Ga0123461_0003
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Entry
Ga0123461_0003 CDS
T05212
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
maes
Mariprofundus aestuarium
Pathway
maes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ga0123461_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maes03400
]
Ga0123461_0003
DNA repair and recombination proteins [BR:
maes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ga0123461_0003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
AAA_16
AAA_27
AAA_22
NACHT
AAA_13
DO-GTPase2
nSTAND_NTPase5
ABC_ATPase
nSTAND3
AAA_25
AAA_33
AAA_30
AAA_28
cobW
Motif
Other DBs
NCBI-ProteinID:
ATX78456
UniProt:
A0A2K8L2J3
LinkDB
All DBs
Position
3566..4699
Genome browser
AA seq
377 aa
AA seq
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MSATPLSIREVKVRHLRCHEEITWNCSEGLNLIIGANGSGKTTLLEAVYLMAHGRSFRQA
RDPFLVKRDAERFFIHGQWHRYGPMNLSVAGRRGQTTLRLQGRDVQRRKDVSESFPVLVD
APQGRKIIDGAPGERRRWLDGLVITCFQNMAIHYERYLRAVMQRSRLLRRRASSEELDVW
EHQIVQYGKPIVLAREKMVAEMNLYLVEEVALTEHPLTISVTMPDYDQQAWLSRLKEKRS
DDLRTGLRFGPHCDLVNIHFQKREIRSAGSRGQQKLAAIAIKMAECGLWTRYRKLIPVLL
LDDCLEALDRTRQLRLLKRLQNSSAQVLMTAPEGVNIASDLNIRIQLLDAHGLCDSATSS
MVSMLDDDTTEVMEEAA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgcaacgcccctttctatacgcgaggttaaggtaaggcacctacgctgccacgaa
gagattacctggaactgctcggaaggactcaacctgatcatcggtgccaatggcagtggg
aaaacaacacttcttgaagctgtttacctgatggctcatggccgctcatttcgtcaggcc
cgtgatccattcctggtaaaaagggatgccgaacgcttttttatccacggacaatggcat
cgttatgggcctatgaacttgtctgttgcaggtcgtcgcggccaaacgacgcttcgcctg
caggggcgtgacgtccagcgtcgtaaggatgtcagtgaaagtttccctgttctggtggat
gcaccgcagggaagaaaaattatcgatggtgcacccggtgagcgcaggcggtggctcgat
ggactggttatcacctgtttccagaatatggctattcactatgaacgttatctgcgggct
gtcatgcagcggtcgcgtttgttaaggcgcagggcttcatcggaagagcttgatgtctgg
gaacatcagatcgttcagtatggcaagccgattgtactggccagagagaagatggtcgca
gagatgaacctgtacctggttgaagaggtggctctcaccgagcatcctttaacgatctct
gtcacaatgcccgattacgatcaacaagcctggttatcaaggttgaaagagaagcgcagt
gacgaccttcgcacagggttgcgcttcggtccgcactgtgatttggttaatatccacttc
cagaagcgtgaaatccgcagtgcaggctcacgcggtcagcaaaaactggcggccatcgct
ataaagatggcagaatgcggactctggacccgatatcgtaaattgattccggttttattg
ctggatgattgtctggaagctctggatcgtacacgtcaactgcgacttcttaagcggctg
caaaacagttcggcacaggtattgatgactgcaccagagggagtcaacatcgcatcggat
ctgaatattagaattcagctgttggatgcgcatggattgtgtgacagtgctaccagctcg
atggtttcgatgcttgatgatgatacaacagaagtaatggaggaagctgcatga
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