Mariprofundus aestuarium: Ga0123461_0233
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Entry
Ga0123461_0233 CDS
T05212
Name
(GenBank) DNA helicase-2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
maes
Mariprofundus aestuarium
Pathway
maes03420
Nucleotide excision repair
maes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ga0123461_0233
03430 Mismatch repair
Ga0123461_0233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maes03400
]
Ga0123461_0233
Enzymes [BR:
maes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ga0123461_0233
DNA repair and recombination proteins [BR:
maes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ga0123461_0233
MMR (mismatch excision repair)
Other MMR factors
Ga0123461_0233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ATX78685
UniProt:
A0A2K8KV57
LinkDB
All DBs
Position
224390..226498
Genome browser
AA seq
702 aa
AA seq
DB search
MSELNNAQQQAVESGDGPQLILAGAGSGKTRTIVHRIGHLIAERGIAPHRILAVTFTNKA
AAELKARLSMLIGDDGGGVTSGTFHALSLRFLRRYADALGFPRSFQVIDSDDQKALVKRL
LKSRNIATDRLHPNYLIGWIEHCKHAGLTPAQAPEHGWNGIDMRELYGEYQAQLKQHERM
DFSDLILNVVLLMRDFKDIAEALRSRFDCVLVDEYQDTNPIQHEWLMLLCAGHRNLTVVG
DDDQSIYGWRGADVSHILDFERHWSGAGLHRLEENYRSTAAILELANAVIRENEDRHEKV
LKATHEQGETPHWKVCNDDYDEARRIAAQLEGWRSRGYPWSEMAILFRSNRQSLVLEQVL
RESQVPYRMIGGVGFFERMEIKDALAYWSLLNGCGDALQLLRVCNRPKRGLGLKGQEQLM
EQLAASGLRACEWLGLIATGSAEGAAKKVAPMALLIQSLQGDLDEMPDRGLRIILDESGY
LKSIEALGEIEAASRLENIRTLQEYIEMSMAQGLTPVEFMDRAALLQNSEEMQRNDDRDD
EPEAISMMSLHRAKGLEFDCVVLPGVEEGQLPHQRALDEGMNGISEERRLLYVGITRARK
HLLLTSARLRRMFGESHYPLPSRFIKKISPELLAQEGATAPSAIGMSQSTSISIGSNVAH
PSFGEGVILSLEGSGDASRVTVQFKRAGIKRLMLKYAALQMI
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagttgaacaacgcccagcagcaggcggttgagtctggcgatggccctcagctg
atcttggctggagcagggtccggtaaaacgcgcaccatcgtacaccgcatcggtcacctg
attgcagagcgcggtattgcaccacacaggattctcgccgtcaccttcaccaacaaggcc
gctgcagaactcaaggcacgcctttccatgctgatcggtgatgatggtggtggcgtcaca
tcaggtacctttcatgcgctctccctccggtttttgcgccgctatgccgatgcacttgga
tttccccgctcttttcaggtgattgattccgatgatcagaaggcactggttaagcgactg
ctgaaatcacgcaatatcgccactgatcgtctgcatccgaattacctgatcggctggatc
gaacactgtaaacatgcaggcctgacacctgcacaggcacctgaacatggctggaacggc
atcgatatgcgcgagctttacggcgaataccaagcgcagttgaagcagcacgagcgcatg
gacttctccgacctgattctcaatgtcgtgctgctgatgcgcgattttaaggatatcgcc
gaagcactgagaagccgttttgattgtgtgctggtcgacgagtatcaggataccaatccg
atccagcatgagtggctgatgctgctctgtgcgggccatcgcaacctgaccgttgttggt
gatgatgatcagagtatttatggctggcgtggtgccgatgtctcccacattctcgatttc
gaacgccactggagcggcgcaggcctgcaccggctggaggagaactaccgctccaccgca
gctattctggagctggccaatgcggtgatccgggaaaatgaagaccgccatgaaaaggtg
ttgaaagcaacacatgaacagggggaaacaccccactggaaggtctgcaacgacgattac
gatgaggcgcgccgcatcgcagctcagcttgagggctggcggagcagggggtatccatgg
agcgagatggcgattctcttccgctccaatcgccagtcgctggtgctggagcaggtgctg
cgcgagtcgcaggtgccctaccgtatgatcggtggtgtcggtttcttcgagcgtatggag
atcaaggatgcactggcttactggtcgctgcttaacggctgtggcgatgcgctgcagctg
ctgcgtgtctgtaacaggccaaaaagagggctcgggctcaaagggcaggagcagctgatg
gagcaactcgctgcttcaggactgagggcatgtgagtggctggggctgattgcaacaggg
agcgcggaaggggcggcaaagaaggttgcccccatggctctgctgatacagagcttgcag
ggtgacctggatgagatgcctgatcgcggtctgaggatcatactggatgagagcggttac
ctgaaaagcatcgaagcactgggagagatcgaagcggcctcgcgtctggagaatatcagg
actctgcaggagtatatcgaaatgtcgatggcgcagggattgacgccggtggagttcatg
gatcgggccgcgctgctgcagaacagcgaagagatgcagcgtaacgatgatcgtgatgat
gaacctgaagcgatttcgatgatgagtctgcaccgtgccaaggggctggagtttgactgc
gtggttcttcccggtgttgaagaggggcaactgccgcatcagcgggccctagatgagggt
atgaatggcatttctgaggaacgcagacttctttatgtcggcatcacccgcgcacgcaaa
cacctgctgctgacgtcagcccggctgcgtcgcatgttcggagagtcgcactacccgctt
cccagccgtttcatcaagaaaatatcccccgagcttctcgctcaggagggggcaacagct
ccttcggcgattggtatgagtcaatccacttcgatatccattggcagcaacgttgcccac
ccgagcttcggcgagggggttatcctctcactggaagggtccggtgacgcatcacgtgtt
actgttcagttcaaacgggccggaatcaaaagactgatgctgaagtatgctgctttacag
atgatttaa
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