Mariprofundus aestuarium: Ga0123461_0975
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Entry
Ga0123461_0975 CDS
T05212
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
maes
Mariprofundus aestuarium
Pathway
maes03410
Base excision repair
maes03430
Mismatch repair
maes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ga0123461_0975
03430 Mismatch repair
Ga0123461_0975
03440 Homologous recombination
Ga0123461_0975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maes03400
]
Ga0123461_0975
DNA repair and recombination proteins [BR:
maes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Ga0123461_0975
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ga0123461_0975
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ga0123461_0975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ATX79395
UniProt:
A0A2K8KWW0
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All DBs
Position
969977..971659
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AA seq
560 aa
AA seq
DB search
MLPEGNTVKGRKLAWRNGSLVADDPVTAWDGLLAARGLSEADPFFSPKLADLPDPFVMAD
MSKAAARVSDAVVNGESIHIFGDFDADGVNGTAILVESLQAAGANVTFSIPHRADDGHGI
GVEPVQQAFAAGTQLGISVDTGTTCFDACDEATRLGLDLIVSDHHLPEASLPGCFALLNP
ARSDCGFGDRRLCGTGVAFFLLMAVWKLLGEKGQRPAFDLRLLLDRVAVATIADVMDLIG
VNRILVYHGLKKLNTDPSTGMRALLNVAKVKKEVTAETVGFYIAPRINAAGRLQHGEAAM
RLLSTSDAAEAAKLAAELDETNKQRRQVEAEVFKQAEAKLGGAKVLAVYDEAWHAGVVGL
AAGRLARKHGKPAAVAFVTPDGAVRASLRGSPGYHVGDLLNACGEHLDGFGGHAGAGGGT
IKSGQWDGFVAAFEKAVDEQEEHGADHMLLPVDGLLGLTAMHIALAERLSRFNPLGRGNP
ACTWLVNDLHIADRRDLKGGVCRLKLTDGSSWIDGIVFGANGFGDAIQPGLTVSVLGQLQ
KDEWRGNGAVQFVIEDLIPA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagaggggaatacggttaaagggcgcaaacttgcatggcgcaatggttcactg
gttgctgatgatccggtgacggcatgggatggtctgctggcagcgcgtggattgagcgag
gcggaccccttcttttcacccaagcttgctgatctacctgatccctttgtcatggctgac
atgagcaaggccgcagcgcgcgtgagtgatgcagtggtgaatggtgaatcgattcatatc
tttggtgattttgacgctgatggcgtcaacggcactgcgatactcgttgaatcgctgcaa
gcggcaggggccaatgtgaccttctcgattccgcatcgcgctgatgatggacacggtatc
ggtgtcgagccggttcagcaggcgtttgctgcagggacccagctcggtatcagcgttgat
accggaaccacctgtttcgatgcctgtgatgaggcaacccgccttggtcttgatctgatt
gtcagcgaccatcatctaccggaagcctcgcttcccggctgttttgcactgcttaacccg
gcccgtagcgactgcggctttggtgatcgaaggttgtgcggtaccggtgtcgccttcttc
ctgttgatggcggtctggaaattgctcggtgagaaagggcaacgccccgcgttcgatctg
cgtcttctattggatcgcgtggctgtggcaaccattgccgatgtgatggacctgataggc
gtgaatcgcattctcgtttatcacggtttgaaaaagcttaataccgatccatcgaccggt
atgcgggcactgctcaatgtcgccaaggtgaaaaaagaggtgacggctgaaacggtcggt
ttctatattgcgccgcgcattaacgcggcaggtcgcctgcagcatggtgaggcggcgatg
cggctgctctccacatctgatgctgccgaagcggctaagctggctgctgagctggatgaa
acgaataaacagcgacgtcaggttgaggctgaggttttcaagcaggccgaggccaagctg
ggtggggcgaaggtgctggctgtctatgatgaggcctggcatgccggtgtggtgggtttg
gcagcgggcagacttgcccgtaagcacggcaaacctgcagcggttgctttcgtaacgccg
gatggtgctgtgagggcctctttgcgcggtagcccgggttaccacgtaggtgacctgtta
aatgcgtgtggcgagcatctggatggttttggcggccatgcgggagccggtggtggcacc
atcaagtcaggtcagtgggatggctttgtcgctgcgttcgaaaaagcggttgatgagcag
gaagagcatggtgctgatcacatgctgctgcctgtagatggtctgcttggactaactgcg
atgcacattgcgctggctgagcgtttgtcacggttcaaccctttagggcgcggcaaccct
gcatgcacatggctggtgaatgatctgcatatcgccgaccggcgtgatcttaaggggggt
gtttgccgtttgaaactgaccgatggatccagctggatcgatggcattgtgtttggtgcc
aatggttttggtgatgccattcagcccggcctgacagtttctgtactgggccaactgcag
aaggatgaatggcgaggcaatggcgcagtgcagtttgtcatcgaggatctgataccagcc
taa
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