Mariprofundus aestuarium: Ga0123461_1643
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Entry
Ga0123461_1643 CDS
T05212
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
maes
Mariprofundus aestuarium
Pathway
maes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ga0123461_1643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maes03019
]
Ga0123461_1643
03009 Ribosome biogenesis [BR:
maes03009
]
Ga0123461_1643
Enzymes [BR:
maes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Ga0123461_1643
Messenger RNA biogenesis [BR:
maes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ga0123461_1643
Ribosome biogenesis [BR:
maes03009
]
Prokaryotic type
rRNA processing factors
Ga0123461_1643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Metal_hydrol
Motif
Other DBs
NCBI-ProteinID:
ATX80056
UniProt:
A0A2K8L723
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All DBs
Position
1666906..1669050
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AA seq
714 aa
AA seq
DB search
MTESKKLMLISAVHDEESRVAIVEDGYLHELDIESASKALTKSNIYKGKITKVEASLQAA
FVEYGSARQGFLSLNEIHPDYWKDGVDKNANPRNLSIQDILQPKQEILVQVVKEERGNKG
AALTTQISLAGRYLVLSPNTTRGGISRKLSDEDRRSMKEILSQLEVPDNMGLIIRTAGKD
QNLEALQRDYSYLRRLWDEIRIKSETTPSPALIYLEGDLATRAIRDHFSDDVQEIWVDNH
EVYTHTKAFVHAVLPGKEKLVKLYRGKKPLFRSYGIEQQCEEVHEREIRLPTGGSIVLDP
TEALTAIDINSARATKGKHIDDTALAINLEAAEEIARQLRIRDIGGLIVIDFIDMASRKH
GQQVEETLRKACKGDKARIQFARISRFGLLEMSRQRLHPSVRESTTEPCPRCQGRGSIRV
VESMALQMLTRMEDWAEVGKKPTLIVQVPSDTGEYLMNNKRANIARIEEVYEVQITLQIR
PDLDIPHYRIERQWSENNQQRVEVLEDTTKRIKPPRSGRKLKPVKPVVGIPTPPPPEPEE
KKDGPLKTLINMLTGAKRKEKLQKQAEEEELRLKKEAESTRRRRGGSGGGRNRRRPSPDK
SNEESTSAQSGQQKGEAQKPKRKRTPKPKTEKPEAEKITASDGGEATEGKPRRRRRRRRR
PAGSEGGATQNQGQDSGATAQPSQSNEQSSTPAKEQRPANIQEKKPESVSSQGE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaatcaaaaaaactcatgctcatcagtgctgttcacgacgaagagagtcgtgtc
gccattgttgaggacggttacctgcacgaactggatatagaatcagccagcaaggcactg
actaaaagtaacatttacaagggtaaaatcaccaaggtagaggcaagcctgcaggcagct
tttgtcgaatacggctctgcccgtcagggtttcctgtcactgaacgagatccaccctgat
tactggaaggatggcgttgataaaaatgccaatccacggaacctctcgattcaggacata
ctgcaaccgaaacaggagatcctggttcaggtggtcaaagaagagcggggcaataaaggc
gctgcactaaccacccagatttcactggccggccgctatctggtactgagccctaacacc
acacgcggcggcatttcccgcaaactatctgatgaagatcgccgctcaatgaaagagatt
ctatcacaactggaagttccagataatatggggcttatcatccgcaccgctggcaaggat
cagaaccttgaggctctgcagcgtgactactcttacctgcgccgattgtgggacgaaatc
cgcatcaagagcgaaaccacaccttcccctgcccttatctacctcgaaggtgatctggcc
acccgcgctattcgtgaccacttttccgatgatgtgcaggagatctgggttgataaccat
gaagtttatacccacaccaaagcatttgtgcatgccgtactcccgggtaaggagaagctg
gttaaactctatcgtggcaagaaaccactgttccgtagctacggtattgaacagcagtgc
gaagaggtacatgagcgcgaaattcgtctgccaactggcggctccatcgtactcgaccca
accgaagcactaactgcgatcgacatcaactcagcacgtgccaccaaaggcaaacatatc
gatgataccgcacttgcaatcaacctggaggctgcagaagagattgcccgccaactgcgc
atccgcgatattggtggcctgatcgtgattgactttatcgacatggccagccgcaaacac
ggccagcaggttgaagagacactgcgcaaggcatgcaagggagataaggcccgcatccag
tttgcccgcatctcccgctttgggcttctcgagatgtcacgtcagcgactgcatccgtcg
gtgcgtgagtcgaccaccgagccctgccctcgctgtcaggggcgcggctcgatccgtgtt
gtcgaatcaatggcattacagatgcttacacgcatggaagattgggccgaagtgggtaag
aaaccgacgctgatcgtacaggtaccatcggacaccggcgaatacctgatgaacaacaag
cgggccaatatcgcacgcattgaagaggtgtatgaggttcagatcacccttcagatccgt
ccggacttggatattccgcattaccgcatcgagcgtcagtggagtgaaaataaccagcag
cgcgttgaggtgcttgaagacacaaccaagcgtatcaagccaccgcgctccggtcgcaag
ctcaagcctgtgaaaccagttgtgggcatccctactccgcctccacctgagccggaagag
aagaaggatgggccgcttaagacattaatcaatatgctcaccggcgcaaagcgcaaggag
aagctgcagaaacaggctgaagaggaagagcttcgcctgaaaaaggaagctgaaagtaca
cgcaggcgccgtggtggcagtggtggtggcagaaaccgtcgtcgcccttcgcctgacaag
agcaatgaagagagcacttcagcccaaagcggccagcagaaaggtgaagcccagaagccg
aaacgcaaacgcacgcctaaacccaagacagaaaaacctgaagccgaaaaaattacggcc
agtgatggcggtgaggctactgagggcaaaccacgcaggcgcaggcgcaggcgtaggcgt
cctgccggaagtgaaggtggggcaacacaaaaccaggggcaagattctggtgcaactgca
cagccttctcagtccaatgaacagagctccaccccagctaaagaacagagacctgcaaac
attcaggaaaaaaaacctgaatccgtttcatctcaaggcgagtga
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