Mariprofundus aestuarium: Ga0123461_1853
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Entry
Ga0123461_1853 CDS
T05212
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
maes
Mariprofundus aestuarium
Pathway
maes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
maes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ga0123461_1853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maes03400
]
Ga0123461_1853
DNA repair and recombination proteins [BR:
maes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ga0123461_1853
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ga0123461_1853
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
AAA_21
AAA_23
DnaJ_CXXCXGXG
nSTAND3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ATX80265
UniProt:
A0A2K8KZ41
LinkDB
All DBs
Position
complement(1886229..1889039)
Genome browser
AA seq
936 aa
AA seq
DB search
MSEKMIRVQGARVHNLKNVSLDIPRDKLVVITGVSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGMMERPDVDAIEGLSPAISIEQKTTSRNPRSTVGTITEVYDYLRLLFARIGQP
YCHGCGKPITSQPASVIIDQLEKLEEGAKVQLLAPIARGKKGEFRKELEKAGKDGFVRVR
IDGEVMGLDDLPVLAKNIKHNIELVVDRLVIRDGIRTRLADSVETALRYGEGMMIALIGK
DEQLFSERFACPDCNISYPDIEPRLFSFNSPVGACPACDGLGSKTVFDPELVVPDGSLSV
EDGAIEPWAGRETFMYRQTLEAVASHVGGDMDSPFNELSEAARKVFLYGSGREKIQFIYE
TPGQNRTVERPFEGVIPNLERRYRESSSDDVREALSKYIDTIDCPSCAGTRLIRSARHVR
INDKSLPEVVAMPLREGVAWINGLKLSDQQLAIADKVLEEISSRLGFMIEVGLDYLSLER
TAGTLSGGEAQRIRLATQIGSALVGVFYILDEPSIGLHQRDNDRLLGTLRRLRDLGNSVL
VVEHDEDAIRSADWVIDMGPLAGEHGGEVVAQGKLKDILKANTLTSDYLSGRKRIEVPNR
RKVLKNHTMIGVEGACEHNLQQVTARFPLSRFSCVTGVSGSGKSTLTNDTLFRGFARAKG
LKTERVGSHTKLIGAENIDKIIDIDQSPIGRTPRSNPATYTAIFTPIRELFAHVPESRAR
GYKPGRFSFNVKGGRCEACQGDGIIKVEMHFLPDVYVHCETCQGKRYNRETLDIRYKGKT
IDEVLHMTVEEALEFFAAIPALKNRLTTLQQVGLGYIQLGQSATTLSGGEAQRVKLSKEL
ARKATGDTLYILDEPTTGLHFHDVAKLLDVLHALVDRGNTVIVIEHNLDVIKTADWIVDM
GPEGGDKGGTVVISGSPEQVAACEASHTGHYLKSSL
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaagatgatccgtgtgcagggtgcgcgggtgcataaccttaaaaatgtcagt
ctggatattccgcgcgataagctggtggtaatcaccggtgtgtccggttccggcaagtcg
tcgcttgcttttgataccctctatgccgaaggccaaaggcgatatgtcgagtcactctca
tcctatgcgcgccagttccttggcatgatggaacgtcccgatgtcgatgccatcgagggg
ctttctccggccatctcaattgagcagaagacaaccagccgtaatccgcgctccacggtt
ggcacaattaccgaggtgtacgactacctgcgactgctttttgcccgcatcggtcaaccc
tactgccatggctgcggcaaaccgatcacctcccaaccggccagtgttattatcgatcag
ctggaaaagctggaggagggggcgaaggttcagctgcttgctccgattgcacgcggcaaa
aagggcgagtttcgcaaggaactggagaaggccggaaaagacggctttgtgcgtgtgcgc
atcgatggcgaggtgatggggctagatgatctccctgtacttgcgaaaaacatcaaacat
aacattgaactggtcgtcgaccggctggtgatccgcgatggtatccgcacccggcttgcc
gattcggtggagactgcactgcgttacggtgaaggtatgatgattgcactgattggcaag
gatgagcaactcttctccgaacgctttgcctgccccgattgcaatatctcatatcctgat
attgaaccgcggctgttctccttcaactcacctgtgggagcctgccccgcctgcgacggg
ctgggtagcaagacggtgttcgatccagaacttgtggttccggatggttcactctcggtg
gaggatggggctattgagccctgggcagggcgggagacattcatgtatcggcagacgctg
gaggcggtcgcaagccatgtcggtggtgatatggactcaccgttcaacgaacttagcgaa
gcggccagaaaggtgttcctctatggcagtggccgggagaaaatccaattcatttacgaa
acgccgggccagaatcgcacggttgagcgccccttcgaaggggtgatccccaaccttgaa
cggcgctatcgtgaatcatcttctgatgatgtgcgcgaggcattgtccaaatatatcgac
accatcgattgcccaagctgcgccggaacgcgactgatcaggtcggcacgccatgtgcgc
atcaacgataaaagcctgccagaggttgttgccatgccgctgcgtgaaggggtggcatgg
atcaatggtttgaaactctccgatcagcagctggccattgccgataaggtgctggaggag
atctcctcgcgacttggctttatgatcgaggtgggacttgattaccttagtctggaacgt
acagcgggaaccctctctggcggcgaagcacagcggatccgacttgccacccagatcggc
tcagcccttgtgggtgttttctatatccttgatgagccctctatcggcctgcaccagagg
gataacgatcgccttctggggacactcaggcgtttgcgtgatcttggtaattcggtgctt
gttgttgaacatgatgaggatgcaattcgcagtgctgactgggtgatcgatatggggcct
ctggctggcgaacacggtggtgaggtggttgcgcagggtaagctgaaggatatcctcaaa
gcgaatacgctcacctctgattatctctccggacgtaaaaggatcgaggtcccgaaccgc
cgcaaggtactgaaaaatcacaccatgatcggtgttgagggggcatgcgagcataacctg
cagcaggttacggcccggtttccgctctcccgcttctcctgcgttaccggcgtgtcgggc
tctggtaaatcgacattgaccaacgatacgctttttcgcggttttgcccgtgccaaaggg
ttgaaaaccgagcgggttggaagccacacgaagttaatcggtgcagagaatattgataaa
attatcgatattgaccagagcccgatcggccgcacgccgcgttccaatccggctacctac
accgctatttttacccccatccgtgaactcttcgcgcatgtgcctgaatcacgggcacga
ggctataaaccgggtcgtttctccttcaatgtgaagggaggaagatgcgaggcgtgtcag
ggtgacggcatcatcaaggtggagatgcacttcctgcctgatgtctatgtgcactgcgag
acgtgtcagggtaagcgctataaccgtgaaacgctcgatatccgctataagggcaagacg
attgatgaagtgctgcacatgacagtggaagaggcgctggagtttttcgcagctattccg
gcgctgaaaaaccggctgacaacactgcaacaggtggggctgggttatatccagttgggg
cagtcggccaccacgctctccggtggtgaggcgcagcgcgttaaactctccaaggagctg
gctcgcaaggcgaccggtgacaccctctacatcctggatgaaccgaccacaggtctgcat
ttccacgatgttgccaagctgttggatgtgctgcatgcactggtggatcgcggcaatacg
gtgattgtaattgagcacaatcttgatgtgatcaaaacagcagactggattgtcgatatg
ggacccgaaggtggcgacaaaggcggcacagtcgttatctcaggcagccctgaacaggtc
gctgcttgcgaggcctcgcatactggccattatctgaagtcatccctgtaa
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