Mariprofundus aestuarium: Ga0123461_2136
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Entry
Ga0123461_2136 CDS
T05212
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
maes
Mariprofundus aestuarium
Pathway
maes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ga0123461_2136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maes03019
]
Ga0123461_2136
03016 Transfer RNA biogenesis [BR:
maes03016
]
Ga0123461_2136
Enzymes [BR:
maes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Ga0123461_2136
Messenger RNA biogenesis [BR:
maes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Ga0123461_2136
Transfer RNA biogenesis [BR:
maes03016
]
Prokaryotic type
tRNA degradation factors
Ga0123461_2136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
DUF3016
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ATX80542
UniProt:
A0A2K8L0G3
LinkDB
All DBs
Position
complement(2177983..2180088)
Genome browser
AA seq
701 aa
AA seq
DB search
MFDVKTSKAEVAGQTISFETGRVARQAGGSVLAQVGDVVVHVAATAAKQPLQGVDFMPLT
VHYQEKTYAAGRFLGGFFKREGRPSEKETLTSRLIDRPIRPLFPKGYFHETQVIATVISA
DESTNPDIIAINGVSAALSISDVPFAEPIAASRVGLINGEFVLNPTYEQIAESDLDLIVA
GTRDAVLMIESEAKELSEEQMIDAIIFGQEGYQPVLDAIEELVKIAGKEKLVVELAGNDA
VKDAVNAAFEADVREAYAIVDKSARAAKIDAFRAAAQEKLAGTEENPGQFSSNDVSSAMK
NLEKSVVRRSIIAGNPRIDGRSTDQVRAIDCQIGVLPRTHGSALFTRGETQALVTITLGT
ESDMQMTESLEGVAKQRFMLHYNFPPYSVGEARRFGPPGRREIGHGRLARRGIEAVLPAM
DDFGYAIRSVSEITESNGSSSMASVCGTSLALMDAGVPTKAAVAGVAMGLILESDGYAVL
TDILGDEDHLGDMDFKVAGTRDGVTTLQLDIKIGGLTREIMREALGQAHAGRIHILDEMA
KCIEAPRGSIADHAPRMITMKIKADKIREVIGAGGKVIRGIVEATGAKVDLEDDGTVKIF
AVTGEAGEAAKKMIEDIVSEVEVGAIYTGKVVKLMDFGAFVRVVGGTDGLVHISQIANHR
VEKVADELSEGQEVRVKVLDVDRNGRIRLSMKELLDEKSES
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtaaaaactagcaaggccgaagtagctggccaaacaatctcattcgaaaca
gggcgtgtagcccgacaggccggtggttcggttctggctcaggttggagacgtggttgtt
cacgttgctgcaaccgctgccaagcagccactgcagggcgtggatttcatgccgctgact
gttcactatcaggaaaaaacatatgcagcaggccgtttccttggcggtttcttcaagcgt
gaaggtcgaccatcggagaaggagacgctgacctcccgtctgattgaccgtccaatccgc
ccgctgttccctaaaggttatttccacgagactcaggttatcgcgactgtcatctctgcc
gatgaaagcactaaccctgatatcatcgccattaacggtgtgtctgctgcactctcgatt
tcagacgtaccatttgctgagccgattgcggcttcccgcgttggcctgatcaatggtgag
ttcgtactcaacccgacctatgaacagattgcagagtccgatctcgacctgattgttgcc
ggcacacgcgatgcggtactgatgattgaatcagaagccaaagagctctctgaagagcag
atgatcgatgcgatcatctttggtcaggaaggctatcagcctgtactggatgcgattgaa
gagctggtgaagattgccggtaaagagaagcttgttgtagagctggctggtaacgatgcg
gtgaaggacgctgtgaatgcagcattcgaagctgacgttcgtgaggcctatgccattgtc
gacaagtctgcgcgtgcagccaagatcgacgccttccgtgctgcggcacaggagaagtta
gctggaactgaagagaatccgggccagttctcatctaacgatgtgagctctgcaatgaag
aaccttgagaagagcgttgttcgtcgctctatcattgccggtaacccgcgtattgacggt
cgctcgaccgatcaggttcgcgccattgattgccagatcggcgttctgcctcgcacccat
ggttccgcgctgttcacccgtggtgaaacacaggcgctggttaccattacactcggtacc
gaatctgacatgcagatgaccgaatctctggaaggcgtagccaaacagcgtttcatgctg
cattacaacttcccgccatactctgtaggtgaagcacgtcgcttcggccctccgggacgt
cgtgagatcggccacggccgtctcgcccgtcgtggtattgaagctgttctgcctgcaatg
gatgatttcggttatgcgatccgctccgtatctgaaattactgagtccaacggttcatca
tcgatggcttctgtttgtggtacctccctggcattgatggacgctggcgtacctaccaag
gcagctgttgcaggtgtggccatgggcctgatccttgagtctgacggttatgccgtactg
actgatatcctaggtgatgaagatcatctcggcgatatggactttaaagtggctggtacc
cgtgatggtgtgaccacgctgcagctggatatcaagatcggcggcctgacccgtgagatc
atgagggaagcgctgggtcaggcacatgctggtcgtatccacattcttgatgagatggcc
aagtgcatcgaggcaccacgcggttctattgctgaccatgcacctcgtatgatcaccatg
aagatcaaagcggacaagattcgcgaagtgatcggagctggcggtaaggtgattcgcggc
atcgttgaagcaaccggtgccaaggttgatctcgaagatgacggcacagtgaagatcttt
gctgtaacaggtgaagcaggtgaagctgccaagaagatgatcgaagatatcgtatctgag
gttgaagttggcgctatttacactggtaaggttgtgaagctgatggacttcggtgctttt
gttcgtgttgttggtggcactgatggtctggttcacatctctcagattgccaaccatcgt
gttgagaaagtggctgatgagctttcagaaggtcaggaagttcgtgtgaaagtgctggac
gtagatcgtaatggtcgtatccgcctctccatgaaagagcttctcgacgaaaaatccgag
agctaa
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