Mariprofundus aestuarium: Ga0123461_2343
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Entry
Ga0123461_2343 CDS
T05212
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
maes
Mariprofundus aestuarium
Pathway
maes02020
Two-component system
maes02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
maes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ga0123461_2343
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ga0123461_2343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maes03021
]
Ga0123461_2343
Transcription machinery [BR:
maes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ga0123461_2343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_IclR
LacI
HTH_31
Sigma70_r4
HTH_26
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ATX80744
UniProt:
A0A2K8L703
LinkDB
All DBs
Position
complement(2396971..2398362)
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AA seq
463 aa
AA seq
DB search
METRLSHKLGQRLALTPQLTQSLKVLAMSSMELESYLEESIESNPLLEMDQESFTTADSA
TQDRAREADEREQWKEQGDNRWETMYSASTRDDMPDSEQMWQGEVNLGDSLHEQVDRQPM
EDSERELAHAMIDSLDDDGYFRNDPAEFAAELKGQIDTDGETVERVLIEVIHQLEPAGLG
ARDLTECLLMQLDGESEIDLWVKRLLLHFSQELFGSDAELAKKAECSDEMIAQARARMRR
LDPFPGHGMRGNNNYYIRPEIIFRRTSGNEIEVEVPASGWRGIKLDERWEGHEWTGKDKE
FMSQAMKEAKWLLHALDQRSETLMKVAICLAQRQRSFLEYGVLGLKPLTLQDVAEEVGLH
ESTISRVTNGKYADTPIGMIELRRFFSAGLPTRGGGTISVYRVQQRVKALIDSEPPGRPI
SDQAIADRLQAEGIEIARRTVAKYREQLGLPPSSQRRRAGRSR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccagactctcccataagcttggccaacggttggctttgactccacaattgacc
cagagcctcaaggttctggcaatgagcagtatggagctggagagctaccttgaggagtcg
atcgaatccaatcctttgctggagatggatcaggagtcgtttactacggccgattcggcg
actcaggatcgcgcccgtgaagccgatgagcgtgagcagtggaaggagcagggtgataat
cgttgggagacgatgtattccgcctccacccgtgatgacatgcctgatagcgaacagatg
tggcagggagaggtaaaccttggcgactcactgcatgagcaggtggatcgtcagcccatg
gaagatagcgagcgggagcttgcccatgccatgatcgattccctcgatgatgatggctac
ttccgcaacgacccggctgagtttgccgcggagttgaaagggcagatcgataccgatggt
gaaaccgtcgagagggtcttgatcgaggtgattcatcagcttgagcctgcaggattgggc
gcccgtgatctgaccgaatgcctgctgatgcagcttgatggtgaatcagagatcgacctc
tgggtgaagcgtctgctgctccatttctcacaagagctctttggatcggatgcggagctt
gccaaaaaggcagagtgctctgatgagatgattgctcaggcccgtgcacgcatgcgccgt
cttgacccattccccggccacggcatgcgtggcaataacaactactatatccgccccgag
attattttccgtcgtaccagcggcaacgagatagaggtggaggtccccgcttcgggttgg
cgcggcattaaacttgatgagcgctgggaggggcatgagtggaccggaaaggataaggag
tttatgagtcaggcgatgaaagaggccaaatggctcctgcacgcgctggatcagcgtagc
gaaacgctgatgaaggtggcaatatgcttggctcagcgccagcgctcctttctcgagtac
ggagtgctggggttgaagcctttgacgttgcaggatgttgctgaagaggtggggctgcac
gagtcaacaatttcacgcgttaccaacggcaagtatgctgacacaccgatcggtatgatc
gagcttcggcgcttcttctcggccggtttaccgacacgcggtggcggtaccatttcggtt
taccgtgtgcagcagcgggtcaaggcgctgatcgactcagagccaccgggaaggccaatc
tcggatcaggcgattgctgatcgcctgcaggcagagggcatcgagatagcacgaagaaca
gttgcgaagtatcgcgaacagttggggctgcctccgagcagccagcggcggcgtgccgga
agatcacgctaa
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integrated database retrieval system
