Mariprofundus aestuarium: Ga0123461_2449
Help
Entry
Ga0123461_2449 CDS
T05212
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
maes
Mariprofundus aestuarium
Brite
KEGG Orthology (KO) [BR:
maes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maes03032
]
Ga0123461_2449
03400 DNA repair and recombination proteins [BR:
maes03400
]
Ga0123461_2449
Enzymes [BR:
maes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Ga0123461_2449
DNA replication proteins [BR:
maes03032
]
Prokaryotic type
DNA Topoisomerases
Ga0123461_2449
DNA repair and recombination proteins [BR:
maes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ga0123461_2449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Motif
Other DBs
NCBI-ProteinID:
ATX80848
UniProt:
A0A2K8L0M9
LinkDB
All DBs
Position
complement(2500046..2502295)
Genome browser
AA seq
749 aa
AA seq
DB search
MSAVVVVESPAKAKTIEKYLGKGYKVLASYGHVRAFPKKDGSVDPDNDFAIKYQIIDDKK
KRLDAIATALRKADTLILASDLDREGEAIAWHVAEVMRERGLLKNKPVLRITFNEITKKA
ITEAVENPSEVDMQLVDAQQARSALDYLVGFTLSPLLWRKIRSGLSAGRVQSVALRLICE
REQLIRDFKPKEFWTIDNECLTGQKGFQAQLHAVDGKALSKFAITDGVNAKVMARRVEKA
SFSVSDVQKKQAKQQPAPPFITTTLQMDASRKLGFTARKTMQVAQKLYEGIEVDGEPVGL
ITYMRTDSVTLSEDAIAEMRSHISSAYGAEYLPEKARRFKTKSKNAQEAHEAIRPTSVGR
TPDSLKTVLDADGLKLYKLIWKRALASQMSPALLDQVRADIDSGDLTLRATGSTLAFPGF
RKLYIEGTDEPGKGDKDRLLPALAVGDAITIKDANAKQHFTEPKPRFSEATLVKELEANG
IGRPSTYASILNVLRAREYVDMEKKRFVPTDTGDWVNKFLVASFGEIVDPKFTASVEDKL
DAVARGESGWKPVLRDFWGPFKAAVDLAATAERPSEETEEKCPECGKPMAIKLGRYGKFM
ACTGYPECKVAQPLNGAAEKAEPELSDQKCDQCGEPMAIKNGRYGKFLGCSAYPECKNIQ
PLEKPKDTGINCPACGQGTFLEKKSRRGKIFYSCSGYPKCKSALWDLPIDKPCPQCGAPF
VTVKITKRRGTEHVCVTEGCGWKELVEAP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgttgtcgtggtggagtctcccgccaaagcgaaaacgatcgaaaaatatctg
ggcaaaggctacaaggtgctggcctcctatggtcatgtgcgcgccttcccgaagaaggat
gggtctgtcgaccctgataacgattttgcaataaagtatcagataattgatgataagaag
aagaggctggatgccatcgcaaccgcgttgagaaaggccgatacacttattcttgcaagc
gatttggatagagagggtgaggctattgcatggcatgttgccgaggtgatgcgcgagcgt
ggcctgctcaaaaataagcctgttctacgtattacgttcaacgagattaccaagaaagcc
atcacagaggcagttgagaatccatcggaagtggatatgcagctagttgatgctcagcag
gcacgcagtgcactcgactaccttgtgggatttacactctccccactattgtggcgcaag
attcgcagtgggctctcagctggccgcgtacagtcggttgccctgcgcctgatttgtgag
cgcgagcagctgattcgcgatttcaaacccaaagagttctggacgattgataatgagtgc
ctcactggtcagaagggttttcaggctcagctgcacgctgtggatggcaaagcattgagc
aaatttgccatcacagatggtgtgaatgccaaggtgatggcacgccgtgtggagaaggct
tcgttcagcgtcagcgatgttcagaagaagcaggctaaacagcagcccgcgcctccattt
atcaccacgacattgcagatggatgcctctcgcaaacttggattcacagccagaaagacc
atgcaggttgcccagaaactgtatgaaggtatcgaagttgatggtgagccggtcggtctg
attacctatatgcgtaccgattcggtaacgctctctgaagacgctattgccgagatgcgt
tctcatatcagtagcgcatatggtgctgaatacctgcctgaaaaagcacgccgcttcaaa
accaagagtaaaaatgcacaggaagcgcatgaggcgattcgaccaacctctgttgggcgt
acgccggattcactgaagacagtactcgatgccgacggcctgaagctatacaagctgata
tggaaacgtgccctggcatcacagatgtcccctgccttgctggatcaggtgcgtgctgat
attgattctggagatttgacgctcagggctaccggctcgacattggctttccccggcttt
cgcaagctctatattgaaggtaccgatgagccgggcaagggtgataaagatcgcctcttg
cctgcgctggctgtgggagatgctattaccattaaggatgcaaatgccaaacagcatttt
accgagcccaaacctcgtttttctgaagcgacactggtgaaagagctcgaagccaatggt
attggccgcccctccacctatgcctctattctgaatgtgctgcgcgcgcgcgaatatgtg
gatatggagaagaaacgttttgttccgaccgataccggtgactgggtcaataaattcctt
gttgcatcattcggtgagattgttgatccgaaatttacagcttcagttgaagacaagctc
gatgctgtcgcccggggtgagtccggttggaagccggtactgcgtgatttctgggggcca
tttaaagcggctgtagatcttgccgcaactgcagagcggccatcggaagaaaccgaagag
aaatgtcctgaatgtggcaagccgatggctatcaagctggggcgttatggtaaattcatg
gcctgcaccggttatcctgagtgcaaggttgcccaacctttgaatggtgcagctgagaag
gcagaaccggagctttcggatcagaagtgtgatcagtgcggcgagccgatggctatcaaa
aatggccgctacggtaaattcctcggctgctcggcttatccagagtgcaagaatatccag
ccgctggagaagccaaaggataccggtatcaactgcccggcatgcggtcagggaaccttc
ctggagaagaaatcccgacgcggcaagattttctactcctgctcgggttatcccaagtgc
aagagtgcactctgggatctgcctatcgacaagccgtgccctcaatgcggtgcgccattt
gtaactgtaaaaattaccaagcgtcgcggtactgagcatgtctgtgtgacagagggctgt
ggctggaaagagctggtggaggcaccttaa
DBGET
integrated database retrieval system
