Mariprofundus aestuarium: Ga0123461_2459
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Entry
Ga0123461_2459 CDS
T05212
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
maes
Mariprofundus aestuarium
Pathway
maes03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ga0123461_2459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maes03021
]
Ga0123461_2459
03400 DNA repair and recombination proteins [BR:
maes03400
]
Ga0123461_2459
Enzymes [BR:
maes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ga0123461_2459
Transcription machinery [BR:
maes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ga0123461_2459
DNA repair and recombination proteins [BR:
maes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ga0123461_2459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ATX80858
UniProt:
A0A2K8L0N9
LinkDB
All DBs
Position
complement(2513526..2517620)
Genome browser
AA seq
1364 aa
AA seq
DB search
MAKQASLKRIRKNFGTIKSPISMPNMLNLQTESYHEFVGYGEAVNDSRLATVFQSVFPVR
DYAGNAELGFEGLEYSPPRYDLDECRRRDLTYALPVKVKLRLKIFENEGEKRAKRKVREV
RDQSVYMGEIPRMTEHGSFIINGTERAIVSQMHRSPGVFFDHDKGKTHASGKFLFKARVI
PYRGSWLDFEFDAKDKVHFRIDLRRKMPVGVLLKAIGLSTQDILDRFYQRRTYRFTDKGV
QVKFVPELFEGTRAVTTIKIGNKRIVAEGKKFTKMAIKRLAEAEVEWIDVPLESVIGEAA
AEPILIPGGEILIDHNQELTEDSISALQGAGVEQFDCLLIDTAVRGPWLADTLRLDTVQS
REEARVEIYRMMRPGEPPTVETAKALFESLFYDPSRYDLSRVGRMKLNSRLEINNDIVPL
DQGTLRDEDILLALNTLLSLRDGIGEVDDIDHLGNRRLRSVGELLENQIRVGLVRMERAV
RERLSSGDLTEMMPSDVVNAKPLIASVKEFFGSSQLSQFMDQTNPLSEVTHKRRLSALGP
GGLSRERAGFEVRDVHPTHYGRLCPIETPEGPNIGLINSLATYAKVNDFGFLESPYRRVV
NSQVTDDVDYLSAIDEATPVIAQANAKVDENGKFVSDLIQCRQGGEFIMAAPADINYMDV
SPSQVVSVCAGLIPFLEHDDANRALMGSNMQRQAVPLLRSEKPLVGTGMEAPLARDSGVS
QVARRGGVVERVDGERIVVKVYEEEQVEGEPGVDIYRLFKYRRSNQNTCFNQRPLVKTGE
IVAKGDIIADGPSTDLGELALGRNALVALMPWRGYNFEDAIVISEKLVKEDVYTSIHIEE
FEAVARDTKLGSEEITRDIPNVGEEALRHLDDCGIAYIGAEVKQGDILVGKITPKGETQL
SPEEKLLRAIFGEKASDVRDTSMRVKPGDEGVVVDVQVFTRRGDEKDDRAKVIEESSIEQ
LYSDKEEERRILETNVVSRLQGLLVGQSAAQFKGVKKGETIKAENIDALNLRDLSGVSVT
DDAVNERVAEILESMDKERGRLESRFEEKVAKVREGSELKPGVIKVVKVFVAVKRKLQPG
DKMAGRHGNKGVISVIVPEEDMPYTEDGTPVDICLNPLGVPSRMNIGQIFEIHMGWAGSS
LGKKIDGMLKDKLPTEELRSFLLECYLEDEQACSDIKGMDEESLLELAHNLRGGIPIATP
VFDGAKEAHIQRMLKLADKPESGQTTLYDGRTGEAFDRDITIGQMYILKLHHLVDEKIHA
RSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRTKMY
ESIVRGDMSFEAGIPESFNVMTKELNALGIDLAMVKHPAENEGE
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacaagcatcattgaaacgtattcgtaaaaatttcggtaccatcaagtcgccg
atcagcatgcctaacatgctgaatctgcagaccgagtcctaccatgagtttgttggttac
ggcgaagccgtaaacgactcacggctggctacagttttccagtcagtatttccggttcgc
gattatgccggtaatgctgagttgggttttgaagggcttgagtacagccctccccgctat
gaccttgacgagtgtcgccgtcgcgatctgacttacgcactgcctgtaaaggtgaagctg
cgcctgaagatcttcgaaaacgagggtgaaaagcgcgccaagcgtaaggttcgcgaagta
cgcgaccagtctgtctacatgggcgagatcccacgcatgaccgagcacggctcgttcatc
attaacggcaccgagcgtgctatcgtttcacagatgcaccgttctccaggtgtgtttttc
gaccacgataagggcaaaacacatgcctcaggcaagttcctgttcaaggctcgcgtcatt
ccttaccgcggctcatggctagatttcgagtttgatgccaaggataaagttcatttccgc
atcgacttgcgccgtaagatgcctgtcggcgttttgcttaaggctatcggactctctaca
caggatatccttgatcgtttttatcagcgccgtacctaccgttttactgataagggtgtg
caggttaaatttgtacctgagttgtttgaaggtactcgtgctgtaacgacaataaaaatt
ggcaataaacgcattgttgctgaaggtaaaaaattcaccaagatggcgattaaacgtctg
gctgaggctgaggttgaatggattgacgtacctctcgaaagcgttatcggtgaggctgct
gctgaacctattctgatccctggtggcgagatccttatcgaccataaccaggaactgact
gaagactccatctccgcacttcagggtgccggagtcgagcagtttgattgcctgttgatc
gataccgccgttcgtggcccgtggctggctgataccctgcgtctggataccgttcagtcg
cgtgaagaggcgcgtgttgagatttatcgcatgatgcgtcctggcgagccaccaacagtt
gaaacagcgaaagcactgtttgaatcactgttctatgatccatcccgttatgatctatcc
cgtgttggccgtatgaagcttaacagccgcctggagatcaataacgatatcgttccactg
gatcagggtacgctgcgtgatgaagatatcctgctggcactcaataccctgctctctctt
cgtgacggtatcggcgaagtagatgatatcgaccacttgggtaaccgtcgcttgcgttca
gtaggcgagctactggaaaaccagattcgtgtcggtcttgttcgtatggagcgcgccgtt
cgtgagcgtttgagctctggcgatctgactgaaatgatgccttcggatgtcgtgaatgcg
aaaccgttgattgcatcggtgaaagagttctttggctcatcccagctctctcagttcatg
gaccagaccaacccgctctccgaggtaacgcataaacgtcgtctttcggcacttggcccg
ggcggtctttcgcgtgaacgcgctggctttgaagttcgagatgttcatccaacccattat
ggccgcctctgcccaattgaaacgcctgaaggtccgaacatcggtctgatcaactcactg
gcgacttacgccaaagtgaacgatttcggtttccttgaatcaccataccgcagggttgta
aatagccaggtgactgatgatgtggattacctctctgctattgatgaagccacaccggtt
attgcacaggcaaacgccaaagtggatgagaatggcaagttcgtatctgacctgatccag
tgtcgtcagggtggcgagttcatcatggccgcacctgctgacatcaactacatggacgta
tcaccatcgcaggtggtttctgtttgtgcgggtctgattccattccttgagcatgatgat
gcgaaccgcgcactgatgggctcaaacatgcagcgtcaggctgttcctctgctgcgtagc
gagaagccactggttggtaccggtatggaagcgcctctggcacgtgactcgggtgtatcc
caggttgcacgtcgtggtggtgtggttgagcgcgttgatggcgaacgtattgttgtgaag
gtttatgaggaagaacaggttgaaggtgagccgggtgtggatatctatcgcctgttcaag
tatcgccgttccaaccagaacacctgctttaaccagcgtccgctggtgaagaccggtgag
atcgttgccaagggtgacatcattgcagatggcccatccactgatctgggtgagctggca
ctaggccgtaatgcgctggtggctctgatgccatggcgcggttacaacttcgaggatgcg
attgtaatctccgagaagctggtgaaagaggatgtttatacctctattcatatcgaagag
ttcgaggcagtagctcgcgacaccaaacttggttctgaagagattacccgcgatatcccg
aatgtgggtgaagaagctctgcgtcatcttgatgattgcggcattgcctacatcggtgcg
gaagttaaacagggtgatatccttgtaggcaagatcacaccgaagggcgaaacccagctc
tctcctgaagagaagctgctgcgtgcgatctttggtgagaaggctagtgacgttcgtgat
acctcgatgcgcgttaagccgggcgatgagggcgtcgttgttgacgttcaggtctttacc
cgtcgtggcgatgagaaggatgatcgcgccaaggttattgaagagtcttcaatcgagcag
ctctactctgataaagaggaggagcgtcgtattcttgagaccaatgtggtgagtcgtctt
cagggtcttcttgttggccagagtgctgcccagttcaagggtgtgaagaagggtgaaacc
attaaggcagagaatatcgatgctttaaatctgcgagacctctccggtgtgtctgttacc
gatgatgcggtgaacgaacgcgttgccgaaattcttgagtctatggacaaagagcgcggc
aggcttgagtcacgcttcgaagagaaggtagccaaggttcgtgaaggttccgaattgaag
cctggcgttatcaaggttgtgaaggtgttcgtggctgttaaacgtaaattgcagccgggt
gacaaaatggctggtcgtcatggtaacaagggtgtgatttcggtcatcgtaccggaagag
gatatgccttataccgaagatggaactccggttgatatttgcctgaacccactgggcgta
ccttcgcgtatgaatatcggtcagattttcgagattcacatgggttgggcaggaagttcg
ctcggcaagaagatcgacggcatgcttaaggataaattgccaacagaggagctacgttcg
ttcctgcttgagtgctatcttgaagatgaacaggcatgcagtgatatcaagggcatggac
gaagagtcgctgcttgagctggcgcataaccttcgcggcggtattccgattgcgacaccg
gtgttcgatggtgccaaggaagcgcatatccagcgcatgctgaagcttgcagataagcca
gagtctggtcagaccacactttatgatggacgtacaggtgaggcatttgatcgtgatatc
actatcggtcagatgtatatccttaaactgcatcacttggtggatgagaagattcatgct
cgttcaaccggtccgtactcacttgttacacagcagccgctgggtggtaaggcgcagttc
ggtggccagcgtttcggtgagatggaagtttgggcgctggaagcatacggcgcggcctac
acgctgcaggagatgctgactgtgaagtcggatgatgttcagggccgtaccaaaatgtac
gagtctattgtacgcggtgacatgtcgtttgaggcaggtattcctgagtcctttaacgtg
atgaccaaagaattgaatgctctgggtattgaccttgcaatggttaagcacccagccgag
aacgaaggagaataa
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