Mycobacterium tuberculosis variant africanum: MAF_00020
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Entry
MAF_00020 CDS
T01575
Symbol
dnaN
Name
(GenBank) DNA polymerase III (beta chain)
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
maf
Mycobacterium tuberculosis variant africanum
Pathway
maf03030
DNA replication
maf03430
Mismatch repair
maf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAF_00020 (dnaN)
03430 Mismatch repair
MAF_00020 (dnaN)
03440 Homologous recombination
MAF_00020 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maf03032
]
MAF_00020 (dnaN)
03400 DNA repair and recombination proteins [BR:
maf03400
]
MAF_00020 (dnaN)
Enzymes [BR:
maf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MAF_00020 (dnaN)
DNA replication proteins [BR:
maf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MAF_00020 (dnaN)
DNA repair and recombination proteins [BR:
maf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MAF_00020 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
SEF14_adhesin
PUA_elF2D
Motif
Other DBs
NCBI-ProteinID:
CCC25076
LinkDB
All DBs
Position
2053..3261
Genome browser
AA seq
402 aa
AA seq
DB search
MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFD
YEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPT
MPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAA
TDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLL
GISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQVRME
FADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAG
KPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggctacgacaagagttggcctcaccgacttgacgtttcgtttgctacgagag
tctttcgccgatgcggtgtcgtgggtggctaaaaatctgccagccaggcccgcggtgccg
gtgctctccggcgtgttgttgaccggctcggacaacggtctgacgatttccggattcgac
tacgaggtttccgccgaggcccaggttggcgctgaaattgtttctcctggaagcgtttta
gtttctggccgattgttgtccgatattacccgggcgttgcctaacaagcccgtagacgtt
catgtcgaaggtaaccgggtcgcattgacctgcggtaacgccaggttttcgctaccgacg
atgccagtcgaggattatccgacgctgccgacgctgccggaagagaccggattgttgcct
gcggaattattcgccgaggcaatcagtcaggtcgctatcgccgccggccgggacgacacg
ctgcctatgttgaccggcatccgggtcgaaatcctcggtgagacggtggttttggccgct
accgacaggtttcgcctggctgttcgagaactgaagtggtcggcgtcgtcgccagatatc
gaagcggctgtgctggtcccggccaagacgctggccgaggccgccaaagcgggcatcggc
ggctctgacgttcgtttgtcgttgggtactgggccgggggtgggcaaggatggcctgctc
ggtatcagtgggaacggcaagcgcagcaccacgcgacttcttgatgccgagttcccgaag
tttcggcagttgctaccaaccgaacacaccgcggtggccaccatggacgtggccgagttg
atcgaagcgatcaagctggttgcgttggtagctgatcggggcgcgcaggtgcgcatggag
ttcgctgatggcagcgtgcggctttctgcgggtgccgatgatgttggacgagccgaggaa
gatcttgttgttgactatgccggtgaaccattgacgattgcgtttaacccaacctatcta
acggacggtttgagttcgttgcgctcggagcgagtgtctttcgggtttacgactgcgggt
aagcctgccttgctacgtccggtgtccggggacgatcgccctgtggcgggtctgaatggc
aacggtccgttcccggcggtgtcgacggactatgtctatctgttgatgccggttcggttg
ccgggctga
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