KEGG   Mycobacterium tuberculosis variant africanum: MAF_09530
Entry
MAF_09530         CDS       T01575                                 
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase)
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
maf  Mycobacterium tuberculosis variant africanum
Pathway
maf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:maf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MAF_09530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:maf03400]
    MAF_09530
Enzymes [BR:maf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     MAF_09530
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MAF_09530
DNA repair and recombination proteins [BR:maf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MAF_09530
SSDB
Motif
Pfam: H2TH zf-FPG_IleRS Zn_ribbon_TFIIB Ribosomal_S13 NFACT_N DUF7577 DUF2752
Other DBs
NCBI-ProteinID: CCC26025
LinkDB
Position
1050122..1050598
AA seq 158 aa
MAGTPQPRALGPDALDVSTDDLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKI
SPFATAGKLSGAQLTCLHEAMASVLSDAVRRSVGQGAAMLKGEKRSGLRVHARTGLPCPV
CGDTVREVSFADKSFQYCPTCQTGGKALADRRMSRLLK
NT seq 477 nt   +upstreamnt  +downstreamnt
gtggccgggacgccgcagccgcgcgcgctcgggcccgatgcgctggacgtcagcaccgac
gacctggccgggctgttggccggcaacaccggccggatcaagaccgtcatcaccgaccag
aaggtaattgccggcatcggcaacgcctatagtgacgaaatcctgcacgtcgcgaagatc
tcgccgttcgccacggccggcaagttatccggcgcacagctcacctgcctgcatgaggcg
atggcgtcggtgctgtcggacgcggtgcgccggtccgtcggccagggcgcggccatgctc
aaaggggagaaacgttctgggcttcgagtacatgcgcgcaccgggttaccctgcccagtg
tgcggtgacactgtgcgggaggtgtccttcgcggacaagtcttttcagtactgtccaacg
tgtcagaccggtggcaaggcgctggccgaccggcgtatgtcgcggctgctcaagtag

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