Mycobacterium tuberculosis variant africanum: MAF_15740
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Entry
MAF_15740 CDS
T01575
Symbol
dnaE1
Name
(GenBank) putative DNA polymerase III (alpha chain) DNAE1 (DNA nucleotidyltransferase)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
maf
Mycobacterium tuberculosis variant africanum
Pathway
maf03030
DNA replication
maf03430
Mismatch repair
maf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAF_15740 (dnaE1)
03430 Mismatch repair
MAF_15740 (dnaE1)
03440 Homologous recombination
MAF_15740 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maf03032
]
MAF_15740 (dnaE1)
03400 DNA repair and recombination proteins [BR:
maf03400
]
MAF_15740 (dnaE1)
Enzymes [BR:
maf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MAF_15740 (dnaE1)
DNA replication proteins [BR:
maf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MAF_15740 (dnaE1)
DNA repair and recombination proteins [BR:
maf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MAF_15740 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
CCC26646
LinkDB
All DBs
Position
1751325..1754879
Genome browser
AA seq
1184 aa
AA seq
DB search
MSGSSAGSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNS
ATKAGIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMMAENATGLRN
LFKLSSHASFEGQLSKWSRMDAELIAEHAEGIIITTGCPSGEVQTRLRLGQDREALEAAA
KWREIVGPDNYFLELMDHGLTIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEA
LLCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDDEVPGACDSTLLIAERVQSYADVW
TPRDRMPVFPVPDGHDQASWLRHEVDAGLRRRFPAGPPDGYRERAAYEIDVICSKGFPSY
FLIVADLISYARSAGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMP
DIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADR
ITKALPPAIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNA
GVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDA
IDNVRANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVV
AVIALYRPGPMGMNAHNDYADRKNNRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRI
AQKVASYSLARADILRKAMGKKKREVLEKEFEGFSDGMQANGFSPAAIKALWDTILPFAD
YAFNKSHAAGYGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLP
PDVNESGLNFASVGQDIRYGLGAVRNVGANVVGSLLQTRNDKGKFTDFSDYLNKIDISAC
NKKVTESLIKAGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEALGQFDLFGSNDDGTGTA
DPVFTIKVPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPN
DAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVLV
NAKVAVRDDRIALIANDLTVPDFSNAEVERPLAVSLPTRQCTFDKVSALKQVLARHPGTS
QVHLRLISGDRITTLALDQSLRVTPSPALMGDLKELLGPGCLGS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttcatctgcggggtcctccttcgtgcacctgcacaaccacaccgagtattcg
atgctggacggtgccgcgaagatcacgcccatgctcgccgaggtggagcggctggggatg
cccgcggtggggatgaccgaccacggaaacatgttcggtgccagcgagttctacaactcc
gcgaccaaggccgggatcaagccgatcatcggcgtggaggcatacatcgcgccgggctcg
cggttcgacacccggcgcatcctgtggggtgaccccagccaaaaggccgacgacgtctcc
ggcagcggctcctacacgcacctgacgatgatggccgagaacgccaccggtctgcgcaac
ctgttcaagctgtcctcgcatgcttccttcgagggccagctgagcaagtggtcgcgcatg
gacgccgagctcatcgccgaacacgccgagggcatcatcatcaccaccggatgcccgtcg
ggggaggtgcagacccgcctgcggctcggccaggatcgggaggcgctcgaagccgcggcg
aagtggcgggagatcgtcggaccggacaactacttccttgagctgatggaccacgggctg
accatcgaacgccgggtccgtgacggtctgctcgagatcggacgcgcgctcaacattccg
cctcttgccaccaatgactgccactacgtgacccgcgacgccgcccacaaccatgaggct
ttgttgtgtgtgcagaccggcaagaccctctcggatccgaatcgcttcaagttcgacggt
gacggctactacctgaagtcggccgccgagatgcgccagatctgggacgacgaagtgccg
ggcgcgtgtgactccaccttgttgatcgccgaacgggtgcagtcctacgccgacgtgtgg
acaccgcgcgaccggatgcccgtgtttccggtgcccgatgggcatgaccaggcgtcctgg
ctgcgtcacgaggtggacgccgggcttcgccggcgatttccggccggtccgccggacggg
taccgcgagcgcgccgcctacgagatcgacgtcatctgctccaaaggtttcccatcgtac
tttctgatcgtcgccgacctgatcagctacgcgcggtcggcgggcataagggtgggtccc
ggccgcggctcggccgccggctcgctggtcgcctacgcgctgggcatcaccgacatcgac
ccgattccacacggtctgctgttcgagcggttcctcaaccccgagcgcacctcgatgccc
gacatcgatatcgacttcgacgaccggcgccgcggtgagatggtgcgctacgcagccgac
aagtggggccacgaccgggtcgcgcaggtcatcaccttcggcaccatcaaaaccaaagcg
gcgctgaaggattcggcgcgaatccactacgggcagcccgggttcgccatcgccgaccgg
atcaccaaggcgttgccgccggcgatcatggccaaagacatcccgctgtctgggatcacc
gatcccagccacgaacggtacaaggaggccgccgaggtccgcggcctgatcgaaaccgac
ccggacgtacgcaccatctaccagaccgcacgcgggttggaaggcctgatccgcaacgcg
ggtgtgcacgcctgcgcggtgatcatgagcagcgagccgctgactgaggccatcccgttg
tggaagcggccgcaggacggggccatcatcaccggctgggattacccggcgtgcgaggcc
atcggtctgctgaaaatggacttcctgggcctgcggaacctgacgatcatcggcgacgcg
atcgacaacgtcagggccaacaggggtatcgacctcgacctggaatccgtgccgctggac
gacaaggccacctatgagctgctgggccgcggcgacaccctgggcgtgttccagctcgac
ggcgggcccatgcgcgacctgctgcgccgcatgcagccgaccgggttcgaagacgtcgtc
gccgttatcgcgctgtaccggcccggcccgatgggcatgaacgcacacaacgactatgcc
gaccgcaagaacaaccggcaggccatcaaacctattcacccggaactcgaagaaccgctg
cgcgagatcctcgccgagacctacggcctcatcgtctatcaagagcagatcatgcgcatc
gcgcagaaggtggcgagctactcgttggcccgcgccgacattctacgcaaggccatgggc
aagaagaaacgcgaggtgctggagaaggagttcgagggcttctccgatggcatgcaggcc
aacgggttctctccggcggccatcaaggcgctgtgggacaccatcctgccgttcgctgac
tacgcgttcaacaagtcacatgccgccggctacggcatggtgtcctactggacggcctac
ctcaaggccaactatcccgccgagtacatggccggtctgttgacgtcggtcggcgacgat
aaagacaaggccgcggtttatctggccgactgccgcaagctcggcatcaccgtgctcccg
cccgacgtcaacgaatctggcttgaacttcgcatcggtcggccaagacatccgctacggg
ctgggcgcggtgcgcaacgttggcgctaatgtcgtgggctcgttgctccaaacccgcaac
gacaagggcaagttcaccgacttttcggactacctgaacaagatcgacatctcggcgtgc
aacaagaaggtgaccgaatcgctgatcaaggcgggtgcgttcgactcgctggggcatgcc
cgcaagggtcttttcctggtgcacagcgatgcggtggactcggtgctgggcaccaagaag
gccgaggcactggggcagttcgatctcttcggcagcaatgatgatgggaccggcaccgca
gatcccgtgttcaccatcaaggtgcccgatgatgagtgggaggacaaacacaaactcgcc
ctagagcgcgagatgctgggactgtacgtctcggggcatcccctcaacggtgtggcacac
ttgctggctgcccaggtcgacaccgcgatcccagcgatcctcgacggcgatgtccccaac
gatgcccaagtgcgggtgggcggcatcctggcgtcggtgaaccggagggtcaacaaaaac
ggaatgccatgggcttcagcgcaattggaggatctcacgggcggcatcgaggtgatgttc
ttcccgcacacctactccagctatggtgccgacatcgtcgacgatgccgtcgtgctggtc
aacgccaaggtggcggtccgtgacgaccgcatcgcattgatcgccaatgacctcacagtg
cccgacttttccaacgccgaggtggagcggccgctggcggtcagcttgcccacccggcag
tgcacctttgacaaggtgagtgcgctcaaacaggtgttggcgcgccaccccggcacctcg
caggtgcatctgcggctcatcagcggagaccggatcaccacgctggcacttgatcagtcg
ttgcgggtgacgccgtcgccggcgttgatgggtgacctcaaggagctgctcggccctgga
tgtctggggagttag
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integrated database retrieval system
