Mycobacterium tuberculosis variant africanum: MAF_29910
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Entry
MAF_29910 CDS
T01575
Symbol
hupB
Name
(GenBank) putative DNA-binding protein HU homolog HUPB (histone-like protein)
KO
K03530
DNA-binding protein HU-beta
Organism
maf
Mycobacterium tuberculosis variant africanum
Brite
KEGG Orthology (KO) [BR:
maf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maf03032
]
MAF_29910 (hupB)
03036 Chromosome and associated proteins [BR:
maf03036
]
MAF_29910 (hupB)
03400 DNA repair and recombination proteins [BR:
maf03400
]
MAF_29910 (hupB)
DNA replication proteins [BR:
maf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MAF_29910 (hupB)
Chromosome and associated proteins [BR:
maf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MAF_29910 (hupB)
DNA repair and recombination proteins [BR:
maf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MAF_29910 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CCC28061
LinkDB
All DBs
Position
complement(3322115..3322759)
Genome browser
AA seq
214 aa
AA seq
DB search
MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGASAAKKVAKKAPA
KKATKAAKKAATKAPARKAATKAPAKKAATKAPAKKAVKATKSPAKKVTKAVKKTAVKAS
VRKAATKAPAKKAAAKRPATKAPAKKATARRGRK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagagctcattgacgtgctcacacagaaattgggctcggaccgtcggcag
gcgaccgccgccgtcgagaatgtcgttgacacgattgtgcgtgcggtacacaaaggcgac
agcgtcaccattaccgggttcggtgtgttcgaacagcgtcgccgcgcggctcgagtggcc
cgcaatccgcgtaccggcgagacagtaaaggtgaagccgacgtcggtgccggcgttccgc
ccgggcgcgcaattcaaagcggttgtgtctggcgcgcagcgtctcccggcagaaggaccc
gctgttaagcgtggtgtgggggccagtgcagccaagaaggtagcgaagaaggcacctgcc
aagaaggcgacaaaggccgccaagaaggcggcgaccaaggcgcccgccaggaaggcggcg
accaaggcgcccgccaagaaagcggcgaccaaggcgcccgccaagaaagctgtcaaggcc
acgaagtcacccgccaagaaggtgaccaaggcggtgaagaagaccgcggtcaaggcatcg
gtgcgtaaggcggcgaccaaggcgccggcaaagaaggcagcggccaagcggccggctacc
aaggctcccgccaagaaggcaaccgctcggcggggtcgcaaatag
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integrated database retrieval system
