Mycobacterium tuberculosis variant africanum: MAF_34310
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Entry
MAF_34310 CDS
T01575
Symbol
groEL1
Name
(GenBank) 60 KDA chaperonin 1 GROEL1 (protein CPN60-1)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
maf
Mycobacterium tuberculosis variant africanum
Pathway
maf03018
RNA degradation
maf05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
maf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAF_34310 (groEL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
MAF_34310 (groEL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maf03019
]
MAF_34310 (groEL1)
03110 Chaperones and folding catalysts [BR:
maf03110
]
MAF_34310 (groEL1)
03029 Mitochondrial biogenesis [BR:
maf03029
]
MAF_34310 (groEL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maf04147
]
MAF_34310 (groEL1)
Enzymes [BR:
maf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MAF_34310 (groEL1)
Messenger RNA biogenesis [BR:
maf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MAF_34310 (groEL1)
Chaperones and folding catalysts [BR:
maf03110
]
Heat shock proteins
HSP60 / Chaperonin
MAF_34310 (groEL1)
Mitochondrial biogenesis [BR:
maf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MAF_34310 (groEL1)
Exosome [BR:
maf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MAF_34310 (groEL1)
Exosomal proteins of other body fluids (saliva and urine)
MAF_34310 (groEL1)
Exosomal proteins of breast cancer cells
MAF_34310 (groEL1)
Exosomal proteins of colorectal cancer cells
MAF_34310 (groEL1)
Exosomal proteins of bladder cancer cells
MAF_34310 (groEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CCC28500
LinkDB
All DBs
Position
complement(3818807..3820426)
Genome browser
AA seq
539 aa
AA seq
DB search
MSKLIEYDETARRAMEVGMDKLADTVRVTLGPRGRHVVLAKAFGGPTVTNDGVTVAREIE
LEDPFEDLGAQLVKSVATKTNDVAGDGTTTATILAQALIKGGLRLVAAGVNPIALGVGIG
KAADAVSEALLASATPVSGKTGIAQVATVSSRDEQIGDLVGEAMSKVGHDGVVSVEESST
LGTELEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAG
TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVN
PDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRAKHLRAEIDKSDSDWDR
EKLGERLAKLAGGVAVIKVGAATETALKERKESVEDAVAAAKAAVEEGIVPGGGASLIHQ
ARKALTELRASLTGDEVLGVDVFSEALAAPLFWIAANAGLDGSVVVNKVSELPAGHGLNV
NTLSYGDLAADGVIDPVKVTRSAVLNASSVARMVLTTETVVVDKPAKAEDHDHHHGHAH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctgatcgaatacgacgaaaccgcgcgtcgcgccatggaggtcggcatggac
aagctggccgacaccgtgcgggtgacgctggggccgcgcggccggcatgtggtgctggcc
aaggcgtttggcggacccacggttaccaacgacggcgtcacggtggcacgtgagatcgag
ctggaagatccgtttgaagacttgggcgcccagctggtgaagtcggtggccaccaagacc
aacgatgtggccggtgacggcaccaccaccgcaaccatcttggcgcaggcactgatcaag
ggcggcctgaggctagtggccgccggcgtcaacccgatcgcgctcggcgtgggaatcggc
aaggccgccgacgcggtatccgaggcgctgctggcatcggccacgccggtgtccggcaag
accggcatcgcgcaggtggcgacggtgtcctcgcgcgacgagcagatcggtgacctggtt
ggcgaagcgatgagcaaggtcggccacgacggcgtggtcagcgtcgaagaatcctcgacg
ctgggcaccgagttggagttcaccgagggtatcggcttcgacaagggcttcttgtcggca
tacttcgttaccgacttcgataaccagcaggcggtgctcgaggacgcgttgatcctgctg
caccaagacaagatcagctcgcttcccgatctgttgccattgctggaaaaggttgcagga
acgggtaagccactactgatcgtggctgaagacgtggagggcgaagcgttggcgacgctg
gtcgtcaacgcgattcgcaagacgttgaaagcggtcgcggtcaaggggccgtacttcggt
gaccgccgtaaggcgttccttgaggacctggcggtggtgacgggtggccaggtggtcaac
cccgacgccggcatggtgctgcgcgaggtgggcttggaggtgctgggctcggcccgacgc
gtggtggtcagcaaggacgacacggtcattgtcgacggcggcggcaccgcagaagcggtg
gccaaccgggcgaagcacttgcgtgccgagatcgacaagagcgattcggattgggatcgg
gaaaagcttggcgagcggctggccaaactggccggcggggttgctgtcatcaaggtgggt
gccgccaccgagaccgcactcaaggagcgcaaggaaagcgtcgaggatgcggtcgcggcc
gccaaggccgcggtcgaggagggcatcgtccctggtgggggagcctcgctcatccaccag
gcccgcaaggcgctgaccgaactgcgtgcgtcgctgaccggtgacgaggtcctcggtgtc
gacgtgttctccgaagcccttgccgcgccgttgttctggatcgccgccaacgctggcttg
gacggctcggtggtggtcaacaaggtcagcgagctacccgccgggcatgggctgaacgtg
aacaccctgagctatggtgacttggccgctgacggcgtcatcgacccggtcaaggtgact
aggtcggcggtgttgaacgcgtcatcggttgcccggatggtactcaccaccgagacggtc
gtggtcgacaagccggccaaggcagaagatcacgaccatcaccacgggcacgcgcactga
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