Paramagnetospirillum magneticum: amb0632
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Entry
amb0632 CDS
T00305
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
amb0632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb0632
Enzymes [BR:
mag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
amb0632
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
amb0632
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
amb0632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-ProteinID:
BAE49436
UniProt:
Q2W9N9
LinkDB
All DBs
Position
680854..681780
Genome browser
AA seq
308 aa
AA seq
DB search
MRVAVGHGAAPYRGNSSLSRGGACLILPAMPELPEVETVARGLAQVWDGRRFVSVETRRA
GLRVPFPKDFARRLTGRTVEAVGRRAKYLVVRLDGGLVMLGHLGMSGRMTIGALRNEPPG
PHDHVEWVTDQGISVTLTDPRRFGLFALCEASDLGGHPLLAGIGPEPLDEAFDAGVLAKA
LAGKTGPIKTVLLDQKVVAGLGNIYVCESLFRAEISPLRPAGSLSRAEVGRLVPLIKAVL
SEAVAAGGSTLRDHARPDGELGYFQHSFQVYGREGETCPGCPGAPACGGILRMTQAGRST
FYCAKRQR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagagtggctgtcggtcatggggcggcaccttatcgcggaaattcgtcgctgtcacgg
ggcggagcctgccttatactccccgccatgcctgaattgcccgaagtcgaaaccgtcgcc
cgtggtctggcccaagtgtgggacgggcggcgctttgtctcggtcgagacgcggcgtgcc
ggactgcgcgtgccgttccccaaggatttcgcccggcgcctgaccggccggacggtggag
gcggtggggcgccgggccaagtatctggtggtgcgcctcgacggaggcctggtcatgctg
ggtcatctcggcatgtcggggcgcatgaccatcggcgccctgcgcaacgagccgcccggt
ccccacgaccatgtggagtgggtgacggaccaggggatcagcgtgacgctcaccgatccc
cgccgtttcgggctgttcgccctgtgcgaggcgtcggacctgggcggtcatccgctgctg
gccgggatcgggccagagcctctggacgaagccttcgacgccggcgtcctggccaaggcc
ctggccggcaagaccggccccatcaagacggtgctgctggaccagaaggtggtggcgggg
ctgggcaacatctatgtgtgcgaaagcctgttccgggcggagatctcgccgctgcgcccc
gccggctccctgagccgggccgaggtggggcgtctggtgccgctgatcaaggcggtgctg
agcgaagctgtggcggcgggcggctccacccttcgcgaccacgcccggcccgacggcgag
ctgggctatttccagcattcctttcaggtctatgggcgcgagggcgagacctgccccggc
tgccccggggcgccggcctgcggcggcatcttgcgcatgacccaggcgggtcgctccact
ttctattgtgcgaagcggcaaaggtga
DBGET
integrated database retrieval system
