Paramagnetospirillum magneticum: amb0697
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Entry
amb0697 CDS
T00305
Name
(GenBank) DNA-directed RNA polymerase
KO
K03086
RNA polymerase primary sigma factor
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
amb0697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mag03021
]
amb0697
Transcription machinery [BR:
mag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
amb0697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
EFhand_Ca_insen
Motif
Other DBs
NCBI-ProteinID:
BAE49501
UniProt:
Q2W9H4
LinkDB
All DBs
Position
complement(751269..753308)
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AA seq
679 aa
AA seq
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MATKSTNTAEVSENQDEAMDGPLLDTLGVAVKKMVAKGKERGYVTYDELNAAMPPEEVSS
EQIEDTMAMLSELGINVVESEEGEDNTPEAAEEETTETEGYSGAGNVDEEDLGRTDDPVR
MYLREMGSVELLSREGEIAIAKRIEAGREMMIGGICESPLTLRAVVDWHDALVEGKMLLR
DIIDLDATYGADPEPEELAEVEAEGVIVEEAAPAGAAEAKPEGEAEPKAEGEEGEKEEGA
EGEPEVEGEGEAEEGEENSISLAAMETELLPIVLETFEVIAATHHKLEKVQDQRLAALNK
GEAVTPAMEKKYDKLKLELVRLMDGIHLNNARIEQLVEQLNGLNRRLMMQEGRLLRLAES
CRVKRQDFLDAYYGSELDPNWIEQVTQRSKQWKDFGARHGKDAADIRATIADISAEAGLP
ISEYRRIVQTVQRGEREASRAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMK
AVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEI
GREPTPEELAEKLSMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAVLPLDA
AIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKA
LRKLKHPSRSRKLRSFLDT
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaatcgacgaatacggccgaagtttccgaaaaccaggatgaggcgatggat
ggcccgctgctcgacaccctgggtgtcgccgtcaagaagatggtggccaagggcaaggag
cgcggctacgtcacctatgacgagttgaacgccgccatgccgcccgaggaggtgtcgtcc
gagcagatcgaagacaccatggccatgctgtccgaactgggcatcaacgtggtcgagagc
gaggaaggcgaggacaacacccccgaagccgccgaggaagaaaccaccgagaccgagggc
tattccggcgccggcaacgtggacgaggaagacctgggccgcaccgacgacccggtccgc
atgtatctgcgcgagatgggctcggtggaactgctgtcgcgcgagggcgaaatcgccatc
gccaagcgcatcgaagccggccgcgagatgatgatcggcggcatctgcgaaagccccctg
acgctgcgcgccgtggtcgactggcatgacgccctggtcgagggcaagatgctgctgcgc
gacatcatcgacctggacgccacctatggcgccgaccccgagcccgaggaactggccgag
gtggaagccgagggcgtcatcgtcgaggaggccgcccccgccggcgccgccgaagccaag
ccggaaggcgaggccgagcccaaggccgagggcgaggaaggtgagaaggaagagggcgcc
gagggcgagcccgaggtcgagggcgaaggcgaggccgaggaaggcgaggagaactccatc
tcgctggccgccatggaaaccgagctgctgcccatcgtgctcgaaaccttcgaggtcatc
gccgccactcaccacaagctggaaaaggtccaggaccagcgcctggccgccctgaacaag
ggcgaggcggtcacccccgccatggagaagaagtacgacaagctgaagctcgagcttgtc
cgcctgatggatggcatccacctcaacaacgcccgcatcgagcagctggtcgagcagctg
aacggcctcaaccgccgcctgatgatgcaggaaggccgtctgctgcgcctggccgaaagc
tgccgggtcaagcgccaggacttcctcgacgcctattacggctcggagctggacccaaac
tggatcgagcaggtcacccagcgctccaagcagtggaaggatttcggcgcccgtcacggc
aaggacgccgccgacatccgcgccaccatcgccgacatctcggccgaagccggcctgccc
atcagcgaataccgccgcatcgtccagacggtgcagcgcggcgagcgcgaggccagccgc
gccaagaaggagatgatcgaggccaatctgcgtctggtgatctccatcgccaagaagtac
accaatcgcggcctgcaattcctcgacctgatccaggagggcaatatcggcctgatgaag
gcggtggataagttcgaataccgccgcggctacaagttctccacctatgccacctggtgg
atccgtcaggccatcacccgctccatcgccgatcaggcccgcaccatccgcattccggtg
cacatgatcgagaccatcaacaagctggtccgcacctcgcgccagatgctgcacgagatc
ggccgcgagccgaccccggaagagctggcggaaaagctgtccatgccgctggagaaggtc
cgcaaggtcctgaagatcgccaaggagcccatctcgctggaaacccccatcggcgacgag
gaagacagccacctgggcgacttcatcgaggacaagaacgccgtcctgccgttggacgcc
gccatccaggccaatctgcgcgagaccaccacccgcgtgctggccagcctcacgccccgc
gaggagcgcgtgctgcgcatgcgcttcggcatcggcatgaacaccgaccacaccctggaa
gaagtcggccagcagttcagcgtcacccgcgaacgtatccgccagatcgaggccaaggcg
ctccgcaagctcaagcacccgtcgcgctcgcgcaagctgcgctcgttcctggatacctga
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