Paramagnetospirillum magneticum: amb0725
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Entry
amb0725 CDS
T00305
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03420
Nucleotide excision repair
mag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
amb0725
03430 Mismatch repair
amb0725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb0725
Enzymes [BR:
mag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
amb0725
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
amb0725
MMR (mismatch excision repair)
Other MMR factors
amb0725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
BAE49529
UniProt:
Q2W9E6
LinkDB
All DBs
Position
785727..788321
Genome browser
AA seq
864 aa
AA seq
DB search
MAVRARVAAMRRRLRMADLPAYGWNALLCQGVWASRGFASMNRLTERHCRNSWDWDSCSP
LCLSACLRHAWPRPRWPLERSVSDSAQVAPPLHGGTGSANIRSMSDPFALDDEAPASPPP
SRASGPRPVPPDAPWLQGLNPEQFQAVTTTDGPVLVLSGAGTGKTKVLTSRLAHILASNL
AQPWQCLAVTFTNRAAREMKERVGQLVGPVSDGIWLGTFHSLCLRILRSHAEAVGLGGDF
TVLDSDDQMRVLKQVMAEAHVDPKGTPPQGLMATIQRWKDRAVTPDKAAADGGAEGQAKT
LYRAYQDRLRSLNACDFGDLLLHVLTVFLSDAEALARWQGRFRYLLVDEYQDTNVAQYLW
LRLLAQTHRNICCVGDDDQSIYSWRGAEVGNILRFEKDFPGAKVVRLESNYRSTPHILAA
ASTLIANNEGRLGKTLRPGIIHEPEAIEKIRTKAVWDGEAEARMVAEEIETLQRRGEKLS
SMAILVRAGFQTREFEERLITTGIPYRVIGGPRFYERLEIRDAMAYLRLVVSAADGLAFE
RVVNTPKRGLGEAAVQTIHMVARAEQVPLLEAARRLVDTDELKPKARQALARFIEDVDRW
RSLLESMPHPELAATILDESGYVDMWKADKSADAPGRVENLKELVAALEEYDSLASFLEH
VALVMENDSRADLDSVVIMTLHGAKGLEFDSVFLPGWEEEVFPHSRALAESGTKGLEEER
RLAYVGLTRARKRVLVSFAANRRIYNQWKSQLPSRFVEELPESHVERSGERGLHGGGLAE
SKAAWNDPAWSRARFGQPRRETAAAPSWGQAKPRESAGGFKPGARVFHDKFGNGTVLSLD
GNKLEIAFDKAGIKKVLDSFVSAV
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcagggcgagggtggcggcgatgagaaggcgtttgcgcatggcggacctccct
gcttacgggtggaacgcgctcctatgtcaaggagtctgggcctcgcggggcttcgcttca
atgaaccgcctcacagagcggcattgcaggaatagctgggactgggattcatgttcgccc
ctctgcctaagcgcgtgcctacggcacgcctggccgcggcctcgatggccgctggagcga
tctgtgtcagattcagcgcaggttgctccaccgttgcacggtgggaccggttccgccaat
atccgctccatgtccgaccccttcgcccttgatgacgaggctcccgcctctccgcccccg
tcccgtgcttccggcccccggccggtgccgcccgatgccccctggctgcaaggcctcaac
cccgagcagttccaggcggtgaccaccaccgacggcccggtgctggtgctgtcgggggcc
ggcacgggcaagaccaaggtgctgacctcgcgccttgcccatatcctggcctccaacctg
gcccagccctggcagtgtcttgccgtgaccttcaccaaccgcgcggcgcgcgagatgaag
gagagggtggggcaactggtcgggccggtgtccgatggcatctggctgggcaccttccac
tcgctgtgcctgcgcatcctgcgctcgcacgccgaggcggtggggctgggcggcgacttc
accgtgctggattcagacgaccagatgcgggtcctgaagcaggtgatggccgaggcccat
gtggaccccaagggcacaccgccccaggggctgatggccaccatccagcgctggaaggac
cgcgccgtcacccccgacaaggcggcggccgacggcggcgccgaggggcaggccaagacg
ctgtaccgcgcctatcaggaccgcctccggtcgctcaacgcctgtgacttcggcgatctg
ctgctgcacgtgctgaccgtgttcctgagcgacgccgaggcgctggcccgctggcagggc
cgcttccgctatctgctggtggacgagtaccaggacaccaacgtcgcccagtatctgtgg
ctgcggctgctggcccagacccaccgcaacatctgctgcgtcggcgacgacgaccagtcc
atctattcctggcgcggggccgaagtgggcaacatcctgcgcttcgagaaggacttcccc
ggggccaaggtggtgcggctggaaagcaactaccgctcgacgccccatatcctggcggcg
gcgtcgaccctgatcgccaacaacgaggggcggctgggcaagacgctgcgtcccggcatc
atccacgagcccgaggccatcgagaagatccgcaccaaggcggtgtgggacggcgaagcc
gaggcccgcatggtcgccgaggagatcgagaccctgcagcgccggggcgagaagctctcc
tccatggccatcctggtgcgcgccggcttccagacccgcgagttcgaggaacggctgatc
accaccggcattccctaccgcgtcatcggcggcccgcgcttctacgagcggctggagatc
cgtgacgccatggcctatctgcggctggtggtctcggccgccgacgggctggccttcgag
cgggtggtcaatacccccaagcgcggcctgggcgaggcggcggtgcagaccattcacatg
gtggcccgcgccgagcaggtgccgctgctcgaagcggcgcggcggctggtggacaccgat
gagctgaagcccaaggcccgtcaggccctggcccgcttcatcgaggatgtggaccgctgg
cgctccttgctggagtccatgccccatcccgaactggccgccaccattctggacgagtcc
ggctatgtggacatgtggaaggccgacaaatcggcggacgcgccgggacgggtggaaaac
ctgaaggaactggtggcggcgctggaggaatacgattccctggccagcttcctcgaacac
gtggccctggtcatggagaacgattcccgcgccgacctggacagcgtggtgatcatgacg
ctgcacggcgccaaggggctggaattcgactcggtgttcctgcccggctgggaagaggag
gtgttcccccattcccgtgccctggccgaatccggcaccaaggggctggaggaggagcgc
cgcctggcctatgtgggcctgacccgcgcccgcaagcgggtgctggtgtcgttcgccgcc
aaccgccgcatctacaaccagtggaagtcgcagcttccgtcgcgcttcgtcgaggaactg
cccgagtcccatgtggagcgctcgggcgagcgcggcctgcatggcggcgggctggcggaa
tccaaggccgcctggaacgaccccgcctggagccgcgcccgctttggccagccccgccgc
gagaccgccgccgctccctcctgggggcaggccaagccgcgggaaagcgccggcggcttc
aagcccggcgcccgcgtctttcacgacaagttcggcaacggcaccgtgctgtccctggac
ggcaacaagctggaaatcgccttcgacaaggcgggcatcaagaaggtgctcgacagtttc
gtgtcggcggtgtag
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