Paramagnetospirillum magneticum: amb1163
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Entry
amb1163 CDS
T00305
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mag
Paramagnetospirillum magneticum
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mag03032
]
amb1163
03036 Chromosome and associated proteins [BR:
mag03036
]
amb1163
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb1163
DNA replication proteins [BR:
mag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
amb1163
Chromosome and associated proteins [BR:
mag03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
amb1163
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
amb1163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
BAE49967
UniProt:
Q2W858
LinkDB
All DBs
Position
1244087..1244356
Genome browser
AA seq
89 aa
AA seq
DB search
MSKSAMSKAIRQAAGCSVAQADAAVEAALAAIVDGVKTEGRFSLIGFGSFSKSERPARQG
RNPRTGKTIDIAASTSIKFSTSAALKKSL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatccgccatgtccaaggccatccgccaagccgccggttgcagcgtcgcccag
gccgatgctgccgtcgaagcggcgctggccgctatcgtcgatggcgtcaagaccgagggc
cgcttcagcctcatcggtttcggctccttctcgaagtcggaacgcccggcccgtcagggg
cgcaatcctcggaccggcaagaccatcgacattgccgcctcgacctcgatcaagttcagc
acctcggcggctttgaagaagtcgctgtaa
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