Paramagnetospirillum magneticum: amb1543
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Entry
amb1543 CDS
T00305
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03030
DNA replication
mag03430
Mismatch repair
mag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
amb1543
03430 Mismatch repair
amb1543
03440 Homologous recombination
amb1543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mag03032
]
amb1543
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb1543
Enzymes [BR:
mag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
amb1543
DNA replication proteins [BR:
mag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
amb1543
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
amb1543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAE50347
UniProt:
Q2W728
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All DBs
Position
1672466..1673704
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AA seq
412 aa
AA seq
DB search
MEMPLRRMLLAAGDPHTIRHECAVISDAIKRVTKGYHAMLAGWWPMADINSTELLSFVAS
RLGEGMGATVVGLPVWLHGDSHSLVMAIESLIWRVADRSGATQFDLSGGSDDHGVWVEFA
WEGEVVEQAQLDRWLAQSLVALGGMTVKDVLEHHAGTDLIRDRREGGGALRIPMRKGVEQ
HGHGRQVLPGRPEFYDMTLLEQSRDTGAMGAQPLKSLTFVVFDTETTGLHPSQGDQIVSI
AGVRIVNGRILSGESFNRIVNPGRPIPAESIRYHGITDDMVVDKPPAGVVLPQFRSYVAD
AVLVAHNAAFDLKFLRMREKDMGIRFDIPVLDTMILSNFLDGPDAGHSLDDICDRYGIEI
TDRHTALGDAMVTAAVLLRQIEALEGRGIQTLDQAVKTLDIAMILHERQRVL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtggagatgcctcttcgccgcatgctgctggcggcgggggaccctcacaccatccgccac
gaatgcgccgtgatttccgatgccatcaagcgggtgaccaagggctatcacgccatgctg
gccgggtggtggcccatggccgacatcaattccaccgagctgctgtcctttgtcgcctcc
cgcctgggcgaggggatgggcgccaccgtggtgggcctgccggtctggctgcacggcgat
tcccattccctggtgatggccatcgaatccctgatctggcgcgtggccgaccgcagcggc
gccacccagttcgacctgtccggcggtagcgacgatcacggcgtctgggtggagttcgcc
tgggagggcgaggtggtcgagcaggcccagctcgaccgctggctggctcagtccctggtg
gccctgggcggcatgaccgtcaaggacgtgttggagcatcatgccggcaccgatctgatc
cgggaccgccgcgaaggcggcggcgccctgcgtattcccatgcgcaagggggtggagcag
cacgggcacggccgtcaggttctgcccggccgccccgaattctacgacatgaccctgctg
gagcagtcgcgcgataccggcgccatgggggcgcagccgctcaaatccctgaccttcgtg
gttttcgataccgagaccaccgggctgcatccgtcccagggcgatcagatcgtctccatc
gccggcgtgcgcatcgtcaacggccgcatcctgtcgggggaaagcttcaaccgcatcgtc
aatcccggccgacccattccggcggaatccatccgctatcacggcatcaccgacgacatg
gtggtggacaagccgcccgccggcgtggtgctgccccagttccgctcctatgtggccgat
gcggtgctggtcgcccacaacgccgccttcgacctgaagttcctgcgcatgcgggaaaag
gacatgggcatccgtttcgacattccggtgctcgacaccatgatcctgtccaatttcctg
gacgggccggacgccgggcattccctcgacgatatctgcgaccgctacggcatcgagatc
accgatcgccatacggcgctgggcgatgccatggtcacggcggcggtgctgctgcgccag
atcgaggcgctggagggacgggggatccagacccttgatcaggcggtcaagaccctggat
atcgccatgatcctgcacgagcggcagagagtgctgtaa
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