Paramagnetospirillum magneticum: amb2250
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Entry
amb2250 CDS
T00305
Name
(GenBank) Uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
amb2250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb2250
Enzymes [BR:
mag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
amb2250
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
amb2250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAE51054
UniProt:
Q2W521
LinkDB
All DBs
Position
complement(2455131..2455766)
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AA seq
211 aa
AA seq
DB search
MSFSAPGADCGLCPRLAEFRRANRVQFPGWHHDPVPSFGGLEAPLLVVGLAPGLKGANRT
GRPFTGDYAGDLLYSTLIRYGLARGEYRAAADDGLELVGCRITNAARCVPPANKPLPAEF
AACRPFLAAEIAAMPNLRGIFCLGRESHDQVLSTLGVRKAANPFGHARLHALPGGLVLGD
SYHCSRYNTNTGRLTEAMFHQAMEALLGALR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttccgcgcccggggccgattgcgggctgtgcccgcgtctggccgagttccgc
cgcgccaaccgggtccaatttcccggctggcatcacgatccggtgccgtccttcggcggc
ctggaagccccgttgctggtggtcggcctcgctcccggcctcaagggcgccaaccgcacc
gggcggccgttcaccggcgattatgccggcgacctgctctattccaccctgatccgctat
ggtctggcgcggggagagtaccgcgccgccgccgatgacgggctggaactggtgggatgc
cgcatcaccaacgcggcgcgctgcgtgccacccgccaacaagccgctgcccgccgagttc
gcagcctgccggcccttcctggccgccgagatcgccgccatgcccaatctgcgggggatt
ttctgcctgggccgcgagtcccatgatcaggtgctgtccaccctgggcgtgcgcaaggcc
gccaaccccttcggccatgcccgcctccacgcgctgccggggggactggtgctgggcgac
agctatcactgctcgcgctacaacaccaataccggccgcctgaccgaggccatgttccat
caggccatggaagccttgctgggggccttgcgttaa
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