Paramagnetospirillum magneticum: amb2252
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Entry
amb2252 CDS
T00305
Name
(GenBank) DNA-directed RNA polymerase, subunit K/omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
amb2252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mag03021
]
amb2252
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb2252
Enzymes [BR:
mag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
amb2252
Transcription machinery [BR:
mag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
amb2252
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
amb2252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF3911
Motif
Other DBs
NCBI-ProteinID:
BAE51056
UniProt:
Q2W519
LinkDB
All DBs
Position
2456506..2456886
Genome browser
AA seq
126 aa
AA seq
DB search
MARVTVEDCVLKVPNRFELVLIAGQRARDISAGAKLTVERDNDKNPVVALREIADDTVPL
DALQNALIQNLQKHVEVDEPEEDEMEGFIADRDLAFENVANEDEMIEDGMSINDTGADFD
VDSGDE
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgttacggttgaagactgtgtactgaaggttccgaaccgcttcgaactggtg
ttgatcgccggccagcgggcacgggacatttccgccggggccaagctgacggtggagcgc
gacaacgacaagaacccggtggtggcgctgcgcgagatcgccgacgacaccgtgccgctg
gatgccttgcagaacgccctgatccagaacctccagaagcacgtcgaggtggacgagccg
gaagaggacgagatggaaggcttcatcgccgaccgtgatctggccttcgagaatgtcgcc
aacgaggacgagatgatcgaggacggcatgtccatcaacgataccggcgccgatttcgac
gtggattccggcgacgaataa
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