Paramagnetospirillum magneticum: amb2258
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Entry
amb2258 CDS
T00305
Name
(GenBank) dsRNA-specific ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mag
Paramagnetospirillum magneticum
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mag03019
]
amb2258
03009 Ribosome biogenesis [BR:
mag03009
]
amb2258
03036 Chromosome and associated proteins [BR:
mag03036
]
amb2258
Enzymes [BR:
mag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
amb2258
Messenger RNA biogenesis [BR:
mag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
amb2258
Ribosome biogenesis [BR:
mag03009
]
Eukaryotic type
90S particles
RNase
amb2258
Prokaryotic type
rRNA processing factors
amb2258
Chromosome and associated proteins [BR:
mag03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
amb2258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
BAE51062
UniProt:
Q2W513
LinkDB
All DBs
Position
2461813..2462499
Genome browser
AA seq
228 aa
AA seq
DB search
MKGAAAELSALLGHAFARPELLAQALTHPSMHQGRKSRTSDPYERLEFLGDRVLGLVVAE
MLFSRFPNEAEGALARRHAALVRREAVARIATEIGLGRCLVLAKGEDDAGGRANPGILAD
ACEAVIGALYADAGFAVAASFVRSRWEPMMEEALAPPKDAKTGLQEWAQGRGKPLPHYQV
LGQEGPPHEPIFLIEVSVEGVGSAVGRGASKRVAEQAAAGLLLEQVKT
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcgccgccgccgagctttccgcgctgctggggcatgccttcgcacggcccgag
cttctggcccaggccctgacccatcccagcatgcaccagggccgcaagtcccggacctcc
gacccttacgagcggctggagttcctgggggaccgcgtcctggggctggtggtggccgag
atgctgttctcccgctttcccaacgaggccgagggcgccctggcccgccgccacgccgcc
ctggtgcgccgcgaggcggtggcgcgcatcgccaccgagatcggcctggggcgctgtctg
gtgctggccaagggcgaggatgacgcgggggggcgggccaatcccggcattctggccgat
gcctgcgaggcggtgatcggcgccctttacgccgacgccggattcgccgtggcggcgagc
ttcgtgcgctcgcgctgggagcccatgatggaagaggccctggcgccgcccaaggatgcc
aagaccggtctgcaggaatgggcccaggggcgcggcaagccgttgccccattatcaggtt
ctgggccaggaaggtccgccgcacgagccgattttcctgatcgaggtcagcgtggaaggt
gtaggctcggccgtgggccgtggtgcctccaaaagagtggcggagcaggcggcagccggc
ctgctgctggaacaggtgaaaacatga
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