Paramagnetospirillum magneticum: amb2569
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Entry
amb2569 CDS
T00305
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03030
DNA replication
mag03430
Mismatch repair
mag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
amb2569
03430 Mismatch repair
amb2569
03440 Homologous recombination
amb2569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mag03032
]
amb2569
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb2569
Enzymes [BR:
mag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
amb2569
DNA replication proteins [BR:
mag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
amb2569
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
amb2569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
T2SSK
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAE51373
UniProt:
Q2W452
LinkDB
All DBs
Position
complement(2752177..2755533)
Genome browser
AA seq
1118 aa
AA seq
DB search
MPAVGITDTANLFGALEFSTSCSDAGIQPIVGAQIAIRREDGGPSKDGRKPEPDTLVLLC
QNEAGYLNLLKLVSKAFLETDAGETPQVTLHDLETRSDGLIVLTGGPAGPVGRLLADGQT
EKAEIVLARLARAFAGRCYVELMRHNLEVEDRIEPLLVSLAYKHDLPLVATNEAFFADRG
MYEAHDALVCIAEGAYISQDERRRLTPEHYFKSPEEMRALFADLPEACDNTLVIARRCAF
GVAKRKPILPPYRMDGLTEAEVLRKKTWEGLEARLEKHVFKEGMTDDEKEHAAKPYRERI
EFELNVIEEMGFPGYFLIVSDFIQWSKAQEIPVGPGRGSGAGSAVAWALTITDLDPLRWG
LLFERFLNPERVSMPDFDIDFCQDRREETIRYVQGKYGYSQVAQIITFGKLQARAVLRDV
GRVLQMPYGQVDRICKLVPNNPANPMTLEQALESEPLLKEQKERDEAVSHLIDLAMKLEG
LYRHASTHAAGVVIGDRPLDELVPLYRDPRSDMPVTQFNMKWVESAGLVKFDFLGLKTLT
VMVTAVKHVKKTKGIDIDLSAIPLDDAKSYELLSRGDAAGVFQLESSGMRDVLRKMGPNR
LEDLIAVVALYRPGPMDQIPRYIACKHGKEEPDYMHPLLEPILKETFGIMVYQEQVMQIA
QVLSGYSLGGADLLRRAMGKKDREEMDRQRAKFVEGATARAVDGGQASMIFDKVAKFAEY
GFNKSHAAAYALIAYQTAWLKANYPAEFMAATMTYEMSNTDKLNSFRQELDRLGIKLLPP
DINASQPTFSVEVLPDGGSAVRYALAALKNVGEAAMKSLVDERERGGRFKDVGDFAARMD
SKVLNRRQLENMVKAGVFDSLDKNRGRLFKNADTLCRYAASAAEDRDSSQMSLLGGSNAP
TLKLESGPDWSPHEKLNQEFEAVGFYLSAHPLDAYAKSMKRLNVLKIAELPRHLQSGGKG
RVRLAGSLLSKQERVSAKGSRYAFLQFSDASGMFEVTCFSEILATSRELLDAGGPLLIDV
DAKLEEDQLRMTCQRIASLDQEAAKAAAGIRVIISDDSAIRQLADLINGEARGRNLVRIV
ARADNREVELGLKSNITLSPKFMGSLRSIPGIAEVEEI
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgtgggcattaccgacaccgccaatctgttcggtgccctggaattctccacc
tcgtgctcggatgcgggcatccagcccatcgtcggcgcccagatcgccatccgccgcgag
gacggcggtccttccaaggacgggcgcaagcccgagcccgacaccctggtgctgctgtgc
cagaacgaggcgggctatctcaacctgctgaagctggtctccaaggccttcctggagacc
gatgcgggcgagacgccccaggtgacgctgcacgacctggagacccggtccgacgggctg
atcgtgctgaccggcggcccggccgggccggtggggcgcctgctggcggacggacagacc
gagaaggccgagatcgtgctggcccggctggcgcgggccttcgccgggcgctgctatgtg
gagctgatgcgccacaaccttgaggtcgaggaccgcatcgagcccctgcttgtctccctg
gcctacaagcatgacctgccgctggtggccaccaacgaggcgttcttcgccgaccggggc
atgtacgaggcccatgacgccctggtctgcatcgccgagggcgcctacatctcccaggac
gagcgccgccgcctgacgcccgagcactatttcaagtcgccggaggagatgcgggcgctg
ttcgcagacctgcccgaggcctgcgacaacaccctggtgatcgcccggcgctgcgccttc
ggcgtggccaagcgcaagccgattctgccgccttaccgcatggacggcctgaccgaggcc
gaggtgctgcgcaagaagacctgggaaggcctggaggcgcggctggaaaagcacgtcttc
aaggagggcatgaccgacgacgagaaggaacacgccgccaagccctaccgcgagcggatc
gagttcgagctgaacgtcatcgaggagatgggctttcccggctacttcctcatcgtgtcg
gacttcatccaatggtccaaggcccaggaaattcccgtcgggccgggccgtggttccggc
gcgggttcggcggtggcctgggcgctgaccatcaccgatctcgatccgttgcgctggggg
ctgctgttcgagcggttcctcaatcccgaacgcgtctccatgcccgacttcgatatcgat
ttctgccaggaccggcgcgaagagaccatccgctacgtgcagggcaagtacggctattcc
caggtggcgcagatcatcaccttcggaaagctgcaggcccgcgccgtgctgcgcgacgtg
ggccgcgtgctgcagatgccttacggccaggtggaccgcatttgcaagctggtgcccaac
aatcccgccaatcccatgaccctggaacaggcgctggaaagcgagccgctgctcaaggag
cagaaggagagggacgaggcggtgtcccacctgatcgatctggccatgaagctggagggt
ctgtaccgccacgcctcgacccatgcggcgggcgtggtgatcggcgaccgtcccttggac
gagctggtgccgctgtaccgcgatccacgctccgacatgccggtcacccagttcaacatg
aaatgggtggaatccgccggtctggtgaagttcgacttcctgggcctcaagacgctgacc
gtgatggtcacggcggtgaagcacgtcaagaagaccaagggcatcgatatcgacctgtcg
gccattccgctggacgacgccaaatcctacgagctgttgtcgcggggcgatgcggccggc
gtgttccagctggaaagttcgggcatgcgcgacgtgctgcgcaagatgggccccaaccgg
ctggaagacctgatcgccgtggtggcgctgtaccgccccggtcccatggaccagattccg
cgttacatcgcctgtaagcacggcaaggaagagccggactacatgcatccgctgctggag
ccgattctgaaggagaccttcgggatcatggtctatcaggagcaggtgatgcagatcgcc
caggtgctgtcgggctattccctgggcggcgccgatctgctgcgccgtgccatgggcaag
aaggaccgcgaggagatggaccgccagcgggccaagttcgtcgagggcgccacggcgcgc
gccgtcgacggcggccaggcctccatgatcttcgacaaggtggccaagttcgccgaatac
ggcttcaacaagagccacgcggcggcctatgccctgatcgcctatcagacggcctggctg
aaggccaattatcccgccgagttcatggcggcgaccatgacctacgaaatgagcaatacc
gacaagctcaattcgttccgccaggagctggaccgcctgggcatcaagctgctgccgccc
gatatcaatgcctcgcagcccaccttctcggtggaggttctgcccgatggcggctccgcc
gtgcgctacgccctggcggcgctgaagaatgtgggcgaggcggccatgaaatcgctggtc
gacgagcgcgagcgcggcgggcgcttcaaggatgtgggcgatttcgcggcgcgcatggat
tccaaggtgctgaaccgccgccaattggagaacatggtcaaggccggcgtcttcgattcc
ctcgacaagaaccgggggcggctgttcaagaacgccgacacattgtgccgctatgccgcc
agcgccgccgaggaccgggattccagccagatgagcctgctgggtggctccaacgcgccg
acgctgaagctggaaagcggccccgactggtcgccccacgagaagctcaaccaggaattc
gaggcggtgggcttctacctttccgcccatccgctggacgcctatgccaagagcatgaag
cgcctcaacgtgctgaagatcgccgaattaccccgtcacctgcagtcgggcggcaagggc
agggtacgcctcgccgggtcgctgctgtccaagcaggagcgggtgtcggccaagggctcg
cgttatgccttcctgcaattctccgacgctagcggcatgttcgaggtcacctgtttctcg
gaaatccttgccacctcgcgggaattgctggatgccggcgggccgctgctcatcgacgtg
gatgccaagctggaggaggatcagctgcgcatgacctgccagcgcatcgcctcgctggac
caggaggcggccaaggccgccgccggcattcgcgtcatcatctccgacgacagcgccatc
cggcagcttgcggatctgatcaacggcgaggccagggggcgcaatctggtccgcatcgtg
gcgcgggccgataatcgcgaagtggaattgggcctcaaatccaacatcaccctttcgccc
aaattcatgggttctctgcgcagcattcccggcatcgccgaggtggaggaaatctga
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