Paramagnetospirillum magneticum: amb2771
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Entry
amb2771 CDS
T00305
Name
(GenBank) Predicted hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
amb2771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mag03019
]
amb2771
Messenger RNA biogenesis [BR:
mag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
amb2771
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
RNase_J_C
Anti-Pycsar_Apyc1
AAA_lid_3
Motif
Other DBs
NCBI-ProteinID:
BAE51575
UniProt:
Q2W3K0
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All DBs
Position
complement(2956288..2957937)
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AA seq
549 aa
AA seq
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MSQGELLFLPLGGVGEIGMNLALYGYDGKWLMVDCGVSFGDETMPMVDVVMADPAWIEER
RDKLAGIVITHGHEDHLGAVQYLWDRLRCPVWATPFSASILKNKLHETGLQAQVPLNVVE
LGSRFKVGPFEIEMISITHSIPEPNLLAIRTPLGTVVHTGDWKFDPDPLLGLPTDTEALR
RVGKEGVLALIGDSTNVFTKGHSGSESEVRGSLIELLGRFDGRIAVSCFATNVARLESIT
VAAMANDRSVALVGRSLWRIDKAARENGYLADLPPFLTEHDAGYLPKDKVVYICTGSQGE
PRAALARIASGDHPHVHLGKGDVCIFSSRIIPGNEKDIFKLQNDLVRQGVEVVTEKDEFV
HVSGHPARQEMEEMYRLLRPRVAVPVHGEARHLQEHARLARACGVEEAIETSNGAMLRLA
PGPVEVIDHVPTGKLCVDGPRIVRLDSEILRNRRRMVFNGSAVVTVVLDKVGKLLGDPQL
TALGLLDAGHEAEEHDAVVEAVRDAIEELPQKVRRDDAVVREAARLAVRRSLRDTHGKKP
ITEVHLVRV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggcgaactcctcttcctgcccctggggggcgtcggcgagatcggcatgaat
ctcgcgctgtacggctatgacggcaagtggctgatggtcgattgcggcgtctccttcggc
gacgagaccatgcccatggtcgacgtggtgatggccgatcccgcctggatcgaggaacgc
cgcgacaagctggcgggcatcgtcatcacccatggtcacgaggaccatctgggcgccgtc
cagtatctgtgggaccggctgcgctgtccggtgtgggcgacgccgttctcggcctccatc
ctgaagaacaagctgcacgagaccgggctgcaggcccaggtgcctctcaacgtagttgag
ctgggatcgcgctttaaggtcggcccgttcgagatcgaaatgatctccatcactcattcc
attcccgagccgaatctgctggctatccgcacgccgctgggcaccgtcgtccatacgggc
gactggaagttcgaccccgatccgctgctgggcctgcccaccgatacagaagctctgcgc
cgggtgggcaaggagggcgtcctggccctgatcggcgattccaccaatgttttcaccaag
ggccattccggttcggaatccgaggtgcgtggcagcctgatcgagctgctgggccgcttt
gacgggcgcatcgccgtgtcgtgcttcgccaccaacgtggcgcggctggaaagcatcacc
gtggcggccatggccaatgaccgcagcgtcgccctggtgggccggagcctgtggcgcatc
gataaggcggcgcgggagaacggctatctcgccgacctgccgcccttccttaccgagcac
gatgccggttacctgcccaaggacaaggtggtctatatctgcaccggcagccagggagag
ccccgcgccgccctggcccgcatcgcgtcgggcgaccatccccatgtgcatctgggcaag
ggggacgtctgcatcttctcgtcgcggatcattcccggcaacgagaaggacattttcaag
cttcagaatgatttggtccgccagggcgtcgaggtggtgaccgagaaggatgaattcgtc
catgtctccggccatcccgcccgccaggagatggaggaaatgtatcgcctgctgcggccg
cgcgtcgcggtgccggtgcatggcgaggcccgccacctgcaggagcacgctcggctggcg
cgggcttgcggggtggaggaggctatcgagacctccaacggcgccatgctgcgcctcgct
cccggtccggtggaggtgattgaccacgtgcccaccggcaagctgtgcgtcgatggcccg
cgcatcgtccgtctggattccgagatcctgcgcaatcgccgtcgcatggtgttcaacggc
tcggccgtggttaccgtggtgctggacaaggtcggcaagctgctgggcgatccgcaactg
acggccctgggcctgctggatgccggtcacgaggcggaagagcacgacgcggtggtcgag
gccgtgcgtgacgccatcgaggaactgccgcagaaggtccgccgggacgacgccgtggtg
cgcgaagccgcccggctggcggtgcgtcgctcgttgcgtgacacccacggcaagaagccc
atcaccgaggtgcatctggtccgggtctga
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