Paramagnetospirillum magneticum: amb3284
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Entry
amb3284 CDS
T00305
Name
(GenBank) DNA polymerase III, epsilon subunit and related 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03030
DNA replication
mag03430
Mismatch repair
mag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
amb3284
03430 Mismatch repair
amb3284
03440 Homologous recombination
amb3284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mag03032
]
amb3284
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb3284
Enzymes [BR:
mag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
amb3284
DNA replication proteins [BR:
mag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
amb3284
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
amb3284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAE52088
UniProt:
Q2W237
LinkDB
All DBs
Position
complement(3560743..3561390)
Genome browser
AA seq
215 aa
AA seq
DB search
MLSLDDLATTSRIVAIDAETTGFKVPTPAEIKKMPKGLRLPGVVIEIGCLELVRGDEGWK
TGESWQRRLQPGGPISKASIDVHGISPAELKTAPSFRDVLDDFEAFIGQDALLAHSAENE
MEFLNFEYARAGRCGFDEMIFGDGDFVCTQELSRQFFPGVPGSLDVLCDRLWVDRSDRFE
HHGALLDAILTAEAFMKMAGGFVQDDTRYMSFGDQ
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccctcgacgatttggccaccacttcgcggattgtcgccatcgatgccgagacc
acggggttcaaggtcccgaccccggccgagatcaagaagatgcccaaggggctgcgcctg
cccggcgtggtcatcgaaatcggctgcctggaactggtccgtggcgacgaggggtggaag
accggcgaaagctggcagcgccgcctccagcccggcggccccatctccaaggcgtccatc
gatgtccatggaatcagcccggccgagctgaagactgcgccgtcgttccgcgacgtcctc
gacgattttgaggccttcatcggacaggacgcgctgttggctcacagcgccgagaacgag
atggagtttctcaatttcgagtatgccagggccgggcgttgcggctttgacgagatgatc
ttcggcgacggggatttcgtctgtacccaggaactgtcccggcagttctttccgggcgtg
cccggttcactggacgtgctgtgcgatcgcctgtgggtcgaccgctccgaccggttcgaa
catcatggggcgctgctcgatgcgattctgacggccgaagccttcatgaagatggccggc
ggcttcgtccaggacgatacccgctatatgagctttggggatcagtag
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integrated database retrieval system
