Paramagnetospirillum magneticum: amb3464
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Entry
amb3464 CDS
T00305
Name
(GenBank) Transcriptional regulator containing GAF
KO
K02584
Nif-specific regulatory protein
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
amb3464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mag03000
]
amb3464
Transcription factors [BR:
mag03000
]
Prokaryotic type
Helix-turn-helix
Other families
amb3464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_5
GAF_2
AAA_2
Mg_chelatase
GAF_3
AAA
HTH_28
AAA_16
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
BAE52268
UniProt:
Q2W1K7
LinkDB
All DBs
Position
3803298..3805010
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AA seq
570 aa
AA seq
DB search
MERMRMTAQKSDESALPLIGIYEISKILGATLDLDKALHDVLNVLASYLNMRHGAVVLKD
EAGKPHLAAVTGMSLRLAREGVLKYPFAAVEKVMNTGIPMVVPDAAEEPLLVEYIAENDD
SLEDERLSFFCVPIKTTDKPFGALSVERSWSDSAQYVFEHDLRFLTMVATLIGQTASLHR
KLANDRETLMTDAARLHKRMAEVRPTLPIRGLEDVVGTSEAMARVFAQVQQAAPTKATIL
LRGESGTGKELVARAIHILSARAQKPFIKVNCAALSESVLESELFGHEKGAFTGAVADRK
GRFELSSGGTLFLDEIGEISSNFQAKLLRVLQEGEFERVGGNKTVKVDVRLIAATNRDLE
AGVADGSFRADLYYRLNVVPLFLPPLRERSGDIPLLAMYFLKQFNEENGRGLAFSQNALE
ALQRCYFPGNVRELENCVYRTATMTKGEVIDEMDLSCKQDTCLSSTLWHKRNPGDKAAPT
LSAPIPVPTGPMIPPAAAAPVAPPQPRPDIPAPSAADPTPPDEDLSERERLVQAMERCGW
VQAKAARLLGLTPRQIGYALKKHNIEIQQL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtggaacggatgcgtatgacggcccagaagagcgacgaaagcgccctgcccctgatcggg
atctacgagatcagcaagattctcggagccaccctggatctggacaaggccctgcacgac
gtcctcaacgtgctggcctcctacctcaacatgcgccacggcgccgtggtgctgaaggac
gaggcaggcaagccccatctggccgcggtcaccggcatgtcgctgcgcctggcccgcgaa
ggcgtgctgaaataccccttcgccgccgtggaaaaggtgatgaacaccggcattcccatg
gtggtgcccgacgccgccgaggaaccgctgctggtcgaatacatcgccgagaacgacgat
tccctcgaagacgagcggctgtcgttcttctgcgtgcccatcaagaccaccgacaagccg
ttcggcgcgctgtcggtggagcgctcgtggagcgacagcgcccagtacgtgttcgagcac
gacctgcgcttcctcaccatggtcgccaccctgatcggccagaccgccagcctgcaccgc
aagctggccaatgaccgcgaaaccctgatgaccgacgcggcccgcctgcacaagcgcatg
gccgaggtccgccccaccctgcccatccggggtctggaagacgtggtcggcacctctgag
gccatggcccgggtcttcgcccaggtgcagcaggccgcccccaccaaggccaccatcctg
ctgcgcggcgaaagcggcaccggcaaggaactggtggcccgcgccatccacatcctgtcg
gcccgcgcccagaagcccttcatcaaggtcaattgcgcagccctgtcggaaagcgtgctg
gaatccgaattgttcggccatgaaaagggcgccttcaccggcgcggtggccgaccgcaag
ggccgcttcgagctgtcgtccggcggcaccttgttcctggacgagatcggcgagatctcc
tccaatttccaggccaagctgctgcgcgtgctgcaggagggcgagttcgagcgagtcggc
ggcaacaagaccgtcaaggtggatgtccgcctgatcgccgccaccaaccgcgacctggaa
gccggcgtcgccgacgggtccttccgcgccgacctgtattaccgcctcaacgtggtgccg
ctgttcctgccgccgctgcgcgaacgctcgggcgacattccgctgctggccatgtacttc
ctcaagcagttcaacgaggagaacggccggggcctggccttctcgcagaacgccctcgag
gcgctgcagcgatgttattttcccggcaatgtgcgcgagttggagaactgcgtctatcgc
accgccaccatgaccaagggcgaggtcatcgacgagatggacctgtcgtgcaagcaggac
acctgcctgtcgtcgaccctgtggcacaagcgcaaccccggcgacaaggcggcccccacc
ctcagcgcccccattccggtccccaccggccccatgatcccgccggccgccgccgctccg
gtggcgccgcctcagcccaggccggacatcccggccccatcggccgccgatcccaccccg
cccgacgaagacctctccgagcgcgagcgcctggtccaggccatggaacgctgcggctgg
gtccaggccaaggccgcccgcctgctgggcctgacgccacggcagatcggctacgccctc
aagaaacacaacatcgagattcaacagctgtga
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