Paramagnetospirillum magneticum: amb3952
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Entry
amb3952 CDS
T00305
Name
(GenBank) Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag00020
Citrate cycle (TCA cycle)
mag00190
Oxidative phosphorylation
mag00650
Butanoate metabolism
mag00720
Other carbon fixation pathways
mag01100
Metabolic pathways
mag01110
Biosynthesis of secondary metabolites
mag01120
Microbial metabolism in diverse environments
mag01200
Carbon metabolism
Module
mag_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mag_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mag_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
amb3952
00650 Butanoate metabolism
amb3952
09102 Energy metabolism
00190 Oxidative phosphorylation
amb3952
00720 Other carbon fixation pathways
amb3952
Enzymes [BR:
mag01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
amb3952
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
GIDA
Thi4
HI0933_like
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
BAE52756
UniProt:
Q2W069
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All DBs
Position
4360140..4361921
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AA seq
593 aa
AA seq
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MAAYKIIDHTYDVVVVGAGGAGLRATMGMGQAGFKTACITKVFPTRSHTVAAQGGIGASL
GNMAEDNWKWHMYDTVKGSDWLGDQDAIEYMCREAVPAVHELEHFGVPFSRTPEGKIYQR
PFGGHMSNFGEKPVQRACAAADRTGHAILHTLYSQCLKHQCEFFIEYFAIDLIMENGACR
GVVAWNLDDGTLHRFRAHKVVLASGGYGRAFFSCTSAHTCTGDGHGLVARAGLPLQDMEF
VQFHPTGIYGSGCLITEGARGEGGYVTNSAGERFMERYAPTAKDLASRDVVSRAMTMEIR
EGRGVGKEHDHIFLHLEHLGAETLELRLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGG
IPTNVYGEVLRPTAENPDATVEGLMAIGEAACVSVHGANRLGTNSLLDIVVFGRACALRA
AETMKPGTAHKPLPKDGSDLALSRFDRLRNANGSMHTSEIRLAMQKTMQMDAAVFRTSKS
LAEGCAKMDQVASTLPQLKINDRSTVWNSDLVEALELENLMDCALATIVSAEARHESRGA
HAHEDYPDRDDVNWQKHSLAWVENGKVKLDYRPVHTYTLTDEVEYIKPQKRVY
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctacaagattatcgaccacacctatgacgtggtggttgtcggtgccggcggc
gccggcctgcgcgccaccatgggcatgggtcaggccggcttcaagaccgcctgcatcacc
aaggtgttccccacccgctcgcacaccgtggccgcccagggcggcatcggcgccagcctg
ggcaacatggccgaggataactggaagtggcacatgtacgacaccgtcaaggggtcggac
tggctgggcgaccaggatgccatcgagtacatgtgccgcgaggccgtgccggcggtgcat
gagctggagcatttcggcgtgcccttctcgcgcacgcccgaaggcaagatctaccagcgc
ccgttcggcggccacatgtccaatttcggcgagaagccggtgcagcgcgcctgcgccgcc
gccgaccgcaccgggcatgccatcctgcacacgctgtactcccagtgcctgaagcaccag
tgcgagttcttcatcgagtacttcgccatcgacctgatcatggagaacggcgcctgtcgc
ggcgtcgtcgcctggaacctggacgacggcaccctgcaccgcttccgcgcccataaggtc
gtgctggcctcgggcggttacggccgcgccttcttctcgtgcacctcggcgcacacctgc
accggcgacggccacggcctggtcgcccgcgccggcctgccgctgcaggacatggagttt
gtgcagttccaccccaccggcatctacggctcgggctgcctgatcaccgagggtgcccgc
ggtgaaggcggctacgtcaccaactccgccggcgagcgcttcatggagcgctatgccccc
accgccaaggacctggcctcgcgtgacgtcgtctcgcgcgccatgaccatggaaatccgc
gaaggccgcggcgtgggcaaggaacacgaccacatcttcctgcacctggagcatctgggg
gccgagaccctggaactgcgcctgccgggcatttccgagacggcgaagatcttcgccggc
gtggacgtgaccaaggagccgatcccggtgctgccgaccgtgcactacaacatgggcggt
atccccaccaacgtgtacggcgaggtcctgcgccccaccgccgagaaccccgacgccacc
gtcgagggcctgatggccatcggcgaggcggcctgcgtctcggtgcacggcgccaaccgc
ctgggcaccaactcgctgctggacatcgtggtgttcggccgcgcctgcgccctgcgcgcc
gccgagaccatgaagcccggcaccgcccacaagccgctgcccaaggacggcagcgacctg
gccctgtcgcgtttcgatcgtctgcgcaatgccaacggctccatgcataccagcgagatc
cgtctcgccatgcagaagaccatgcagatggacgcggcggtgttccgcacctccaagtcg
ctggccgagggctgcgccaagatggatcaggtcgcgtcgaccctgccccagctcaagatc
aacgaccgctccaccgtgtggaactcggatctggtcgaggcgctggagctggagaatctg
atggattgcgccctggccaccatcgtgtcggcggaagcccggcacgaaagccgcggcgcc
cacgcccacgaggattatcccgaccgcgacgacgtcaactggcagaagcactcgctggcc
tgggtcgagaacggcaaggtgaagctggactaccgtccggtgcacacctacacgctcacc
gacgaggtcgagtacatcaagccgcagaagcgcgtgtactaa
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