Paramagnetospirillum magneticum: amb4103
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Entry
amb4103 CDS
T00305
Name
(GenBank) DNA polymerase III, gamma/tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03030
DNA replication
mag03430
Mismatch repair
mag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
amb4103
03430 Mismatch repair
amb4103
03440 Homologous recombination
amb4103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mag03032
]
amb4103
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb4103
Enzymes [BR:
mag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
amb4103
DNA replication proteins [BR:
mag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
amb4103
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
amb4103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_30
AAA_5
AAA_16
AAA_14
AAA_18
AAA_19
AAA_assoc_2
DUF6087
nSTAND3
DUF815
AAA_24
TsaE
DNA_pol3_delta_C
AAA_2
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BAE52907
UniProt:
Q2VZR8
LinkDB
All DBs
Position
4506847..4508646
Genome browser
AA seq
599 aa
AA seq
DB search
MAPMSDTPAPTPYRVLARKYRPTDFAGLIGQEAMVRTLSNAIKTGRLAHAFVLTGVRGVG
KTTTARIIARALNCVGLDGKGGPTIDPCGQCEHCRAIAEDRHVDILEMDAASRTGVNDIR
EIIEGVRYRPTSARFKIYIIDEVHMLSTAAFNALLKTLEEPPEHVKFVFATTEIRKIPVT
VLSRCQRFDLRRVEMEVLAKHFESIAAKEQAEIEPAALKLIARAADGSVRDGLSLLDQAI
SHGAGAVTEAQVRDMLGLADRARVFDLLDAIMKGQVPAALDQITDQYAAGADPVVVLQDM
LELVHWLTRLKVTPDAADQLGASETERVKGAEMSKTLSLAALTRAWQMLLKGLGETRNAP
NPLQAAEMAVVRLAYAAELPSPAELVEQLRANPPPPPAPRGPGGGGSGGGFGGGGADAVS
NHHMGGGPVHGPATALKLQPAPVAETVTLPAMPPDFAAVVALFTERREGLIAVQLRTQVN
LVSFAAGRIEWRQNSGVGSDLAPKTARLLSEWTGRRWTVSVNSTDSAQPTLAEQEANAEL
RRRADAAELPLVKAVLAAFPGATIEAVRDLGAEELPDAPPPEDPEAMLDDEMLPGEEDL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
ttggcccccatgagcgacacccccgcccccacgccctatcgcgtcctggcccgcaagtac
cggccgaccgacttcgccggtctgatcgggcaggaggccatggtgcgcaccctgtccaac
gccatcaagaccgggcggctggcccatgccttcgtgctgaccggcgtgcgcggcgtgggc
aagaccaccaccgcccgcatcatcgcccgcgccctgaactgcgtcggcctggacggcaag
ggtgggccgaccatcgatccctgcggccagtgcgagcattgccgcgccatcgccgaggac
cgccacgtcgacatcctggagatggacgccgccagccgcaccggcgtcaacgacatccgc
gagatcatcgagggcgtgcgctatcgccccacctcggcccgcttcaagatctacatcatc
gacgaggtccacatgctgtccacggcggcgttcaacgcgctgctgaagacgctggaggaa
ccgcccgagcacgtgaagttcgtgttcgccaccaccgagatccgcaagatccccgtgacc
gtgctgtcgcgctgccagcgcttcgacctgcgccgggtggagatggaggtgctggccaag
cacttcgaatccatcgccgccaaggaacaggccgaaatcgagccggcggcgctcaagctg
atcgcccgggccgccgacggttcggtgcgcgacgggctgtccctgctggatcaggccatc
agccatggcgccggagcggtgaccgaggcccaggtgcgcgacatgctggggctggccgac
cgcgcccgggtcttcgacctgctggacgccatcatgaaggggcaggttcccgccgccctg
gaccagatcaccgaccaatacgccgccggcgccgatccggtggtggtgctgcaggacatg
ctggaactggtgcactggctgacccggctcaaggtcactcccgacgccgccgaccagttg
ggcgcctcggagaccgagcgggtcaagggcgccgagatgtccaagaccctgtccctggcc
gcgctcacccgcgcctggcagatgctgctgaagggcttgggcgagacccgcaacgccccc
aacccgctgcaggccgccgagatggcggtggtccgcctggcctatgccgccgaactgccc
agtccggccgagctggtcgagcaattgcgcgccaatccccccccgccccccgccccgcgc
ggccccggcggaggaggtagcggtggcggctttggcggcggcggtgccgacgcggtctcc
aatcatcatatgggcggcggcccggtgcacggccccgccaccgccctgaagcttcagccc
gcccccgtggccgagaccgtgaccctacccgccatgccccccgacttcgcggcggtggtg
gcgctgttcaccgaacgccgcgaaggcctgatcgccgtccaactgcggacacaggtcaat
ctggtgtccttcgccgccgggcgcatcgagtggcgccagaacagcggcgtcggctcggat
ctggcgcccaagacggcgcgcctgctgtcggaatggaccgggcggcgctggacggtctcg
gtcaattccaccgattccgcccagccaaccctggccgagcaggaggccaacgccgagctg
cgccgccgcgccgacgccgccgaacttccgctggtcaaggcggtgctggccgcctttccc
ggcgccaccatcgaggcggtgcgcgatctcggcgccgaggaattgcccgatgccccgccg
cccgaggacccggaggcgatgctggacgacgaaatgctccctggagaggaagacctatga
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