Paramagnetospirillum magneticum: amb4211
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Entry
amb4211 CDS
T00305
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03030
DNA replication
mag03410
Base excision repair
mag03420
Nucleotide excision repair
mag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
amb4211
03410 Base excision repair
amb4211
03420 Nucleotide excision repair
amb4211
03440 Homologous recombination
amb4211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mag03032
]
amb4211
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb4211
Enzymes [BR:
mag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
amb4211
DNA replication proteins [BR:
mag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
amb4211
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
amb4211
NER (nucleotide excision repair)
GGR (global genome repair) factors
amb4211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAE53015
UniProt:
Q2VZG0
LinkDB
All DBs
Position
complement(4623195..4625981)
Genome browser
AA seq
928 aa
AA seq
DB search
MGEAPRHVTLIDGSGFIFRAFHGLPPMTRADGTPVNAVYGFTTMLMKLLADSSSDHVAVI
FDSSRKTFRSAIYPEYKAHRPPAPEELVPQFPLVREATRAFDLPAIELEGFEADDLIATY
ARLAVEAGARVTIVSSDKDLMQLVGPGVEMIDPMKNRTIGEAEVREKFGVSPDKVVDVQA
LCGDSSDNVPGVPGIGVKTAAQLIEEYGDLDTLLARASEIKQPKRRESLIANADLARISR
ELVRLRTDAPVPVPLSELDVKPPAPEKLAAFCAAQGFRSLMGRLNAKIPTAAPTATRAVL
PTEAPAEAPSLPPKVETAYELVTDLAALENWIALATGGGLVGFDTETTGLDPLRARLVGV
SLAVAPGRACYIPVLHAPAQAQGDLLGGPSTDAPQIIPAAETLARLKPLLADPSVLKVGH
NIKYDMQVMAMQGLAVEPFDDTMLLSYALDGASHGHGLDELCLLHLGHANIPFSEVCGSG
RNQVTFDRVPLDKARDYAAEDADMTLRLHALLKPRLLSERMVSVYETLERPLVPVIAAME
RDGIKVDRAQLMALSEDFGRRLTELETEVIALNNGEAFNLGSPQQLGKVLFETLNLPGGK
KTKTGQWATGADVLEELAPLHALPARLLDWRQLSKLKGTYTDALVAQINPATGRVHTSYS
LAATTTGRLSSSDPNLQNIPIRTEEGRKIRHAFVAEPGKKLVSADYSQIELRLVAHVAEI
AGLRDAFAHGADIHAITASQVFGVPLDGIDPALRRRAKAINFGIIYGISAFGLAAQLGIP
QGEAKAYIEAYFARYPEIRAYMERTKEEARDQGFVTTLFGRKVFTPGIKDKNGAMRAFAE
RAAINGPIQGGAADIIKRAMIRLPAALAAAGLSARLLLQVHDELVLEAPEAEADATVAVV
KQVMEAAASLSVPLLVEAGIADTWGAAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgaagccccccggcatgtgacgctgatcgacggctcgggcttcatcttccgggcc
ttccacggcctgccgcccatgacccgggccgacgggacgccggtgaacgccgtctatggc
ttcaccaccatgctgatgaagctgctggccgactcgtcctccgatcatgtggcggtgatc
ttcgattcgtcgcgcaagaccttccgcagcgcgatctaccccgaatacaaggcccaccgc
ccgcccgcccccgaggagctggtgccccagttcccgctggtgcgcgaggcgacgcgggcc
tttgacctgccggccatcgagctggaaggcttcgaggccgacgacctgatcgccacctat
gcccgtctggcggtggaggcgggcgccagggtcaccatcgtctcgtccgacaaggacctg
atgcagttggtggggccgggggtcgagatgatcgaccccatgaagaaccgcaccatcggc
gaggccgaagtgcgggaaaagttcggcgtttcccccgacaaggtggtcgacgtccaggcc
ctgtgcggcgattcctcggataacgtgcccggcgtgcccggcatcggcgtcaagacggcg
gcgcagttgatcgaggaatacggcgatctcgacaccctgctggccagggcgtcggagatc
aagcagcccaagcgccgcgaatccctgatagccaatgccgatctcgcccgcatctcgcgc
gagttggtgcggctgcgcaccgacgcgccggtgccggtgccgctgtccgagctggacgtc
aagccgccggcgccggaaaagctggccgccttctgcgccgcccagggcttccgctcgctg
atgggccgcctaaacgccaagattcccaccgccgctcccaccgccacgcgggcggtgctg
cccaccgaggctccggccgaggcgccgtccctgccgcccaaggtggagaccgcctacgag
ctggtcaccgatctggcagcgctggaaaactggatcgccctggccaccgggggcgggctg
gtgggcttcgacaccgagaccactggcctcgaccccctgcgcgcccggctggtgggcgtg
tccctggcggtggcgccggggcgggcctgctacattcccgtgctgcacgccccggcccag
gcccagggcgacctgctgggcggcccgtcgaccgacgcgccccagatcattcccgccgcc
gagaccctggcccggctgaagccgctgctggccgatccttcggtgctgaaggtcgggcac
aacatcaagtacgacatgcaggtgatggccatgcagggcctggccgtcgagcccttcgac
gacaccatgctgctgtcctacgccctggacggggccagccacggtcacggcctggacgag
ctgtgcctgctgcatctcggccacgccaacatcccgttctccgaggtctgcggcagcggg
cgcaatcaggtgaccttcgaccgggtgccgctggacaaggcccgcgactatgccgccgag
gacgcggacatgacgctgcggctgcatgcgctgttgaaaccgcgccttttgtccgagcgc
atggtcagcgtctatgagacgctggaacgtccgttggtgccggtgatcgccgccatggag
cgcgacggcatcaaggtcgaccgcgcccagctgatggcgctgtccgaggatttcggccgc
cgcctgaccgagttggagaccgaggtcatcgccctcaacaatggcgaggccttcaacctg
ggctcgccgcagcaactgggcaaggtgctgttcgagaccctgaacctccccggtggcaag
aagaccaagaccgggcaatgggccaccggcgccgacgtgctggaagagctggcgccgttg
catgcgctgcccgcccgcctgctggactggcgccagttgtccaagctgaagggcacctat
accgacgccctggtggcccagatcaatccggccaccggccgggtccacaccagttattcc
ctggcggccaccaccaccgggcggctgtcgtcgtcggaccccaacctgcagaacattccc
atccgcaccgaggaaggccgcaagatccgccacgctttcgtcgccgaaccgggcaagaaa
ctggtcagcgccgactactcccagatcgaactgcgtctggtggcccatgtggcggagatc
gccggcctgcgcgatgccttcgcccatggcgccgacatccacgccatcaccgcgtcacag
gtgttcggcgtgccgctggacgggatcgacccggcgctccgccgccgggccaaggccatc
aatttcggcatcatctacggtatcagcgccttcggtctggcggcccagctgggcatcccc
cagggtgaggccaaggcctatatcgaggcttatttcgcccggtatcccgaaatccgcgcc
tatatggagcggaccaaggaagaggcccgcgaccagggcttcgtcaccaccttgttcggc
cgcaaggtcttcaccccgggcatcaaggacaagaacggcgccatgcgcgccttcgccgag
cgcgccgccatcaacggccccatccagggcggggccgccgacatcatcaagcgcgccatg
atccgcctgcccgccgccctggccgctgccggcctgtcggcccggctgctgctccaggtc
catgacgaactggtgctcgaagcccccgaggcggaggccgacgccaccgtcgcggtggtc
aagcaggtcatggaagctgccgccagcctctccgtccccctgctggtggaagccggcatc
gccgacacctggggtgcggcgcactga
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