KEGG   Microbulbifer agarilyticus: Mag101_01465
Entry
Mag101_01465      CDS       T04709                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
maga  Microbulbifer agarilyticus
Pathway
maga02024  Quorum sensing
maga03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:maga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mag101_01465
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Mag101_01465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maga03019]
    Mag101_01465
   03036 Chromosome and associated proteins [BR:maga03036]
    Mag101_01465
Messenger RNA biogenesis [BR:maga03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Mag101_01465
Chromosome and associated proteins [BR:maga03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Mag101_01465
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AQQ66460
UniProt: A0A1Q2M184
LinkDB
Position
342017..342304
AA seq 95 aa
MSKGHSLQDPYLNVLRKERIPVSIYLVNGIKLQGQIESFDQFVVLLKNTVSQMVYKHAIS
TVVPSRAVRVPLMNPAGPGGEGGAPEGGERDSFGG
NT seq 288 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcacagcttacaagacccttacctgaacgttttgcgtaaagagcgtatc
cctgtttctatctatctggtaaacggcattaaattgcagggccagattgaatctttcgac
cagtttgtcgtgctgttgaaaaacaccgttagccagatggtttataagcacgcgatttcc
accgtagtgccgtcccgcgccgtgcgcgtaccgctgatgaatccggctggtccgggtggt
gaaggcggcgcaccggaaggcggtgagcgcgatagcttcggcggctaa

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