Microbulbifer agarilyticus: Mag101_02755
Help
Entry
Mag101_02755 CDS
T04709
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
maga
Microbulbifer agarilyticus
Pathway
maga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mag101_02755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maga03019
]
Mag101_02755
Enzymes [BR:
maga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mag101_02755
Messenger RNA biogenesis [BR:
maga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mag101_02755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HI1480
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
AQQ66686
UniProt:
A0A1Q2M1Y8
LinkDB
All DBs
Position
661275..662744
Genome browser
AA seq
489 aa
AA seq
DB search
MLFEDLGLEPEIARAVAEQGYTQPTPIQQQAIPVVMRGGDVMAAAQTGTGKTAGFTLPLL
HRLSAGPRARNNQVRALVLTPTRELAAQVFDNVQSYSEHLPMRHSVVFGGVKINPQMMRL
RGGADILVATPGRLLDLYNQRAIKFDRLETLVLDEADRMLDMGFIHDIKKILRVLPAKRQ
NLLFSATFSPEIRGLAKGLVNDPVEIDVAPRNSTTKTVMQKLHPVDKSRKASLLCHLIKE
NDWHQALVFSRTKHGANRLAKQLEQHRIPAAAIHGNKSQNARTKALADFKNGKVQILVAT
DIAARGIDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGHAVSLVSADEIKQLRDIER
LIQKPIEREEIEGFEPDHVVPESGGKVGKGSQVRRGGSGRSKSGNGKAGGNKPSGNKSGG
NKPSGNRSASSNRANGNHSEGRNGNERNGNGRSGNSRSGNRAANGNSNGNTAAKPGQRRR
RPQRRTESA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgaagatctcggcctcgagccggaaattgcccgcgccgtggcggagcagggc
tatacccaacctacccctatccagcagcaagccattccggtggtgatgcgcggtggcgac
gtcatggcggccgcacagaccggtaccggtaaaacggctggttttaccctgccactattg
caccggctgagcgccggcccgcgcgcgcgcaacaatcaggtgcgtgcgctggtactgacc
ccgacgcgcgagctcgctgcgcaggtgttcgacaatgtgcagagctacagtgagcacctg
cccatgcgacactccgtggtgttcggtggggtaaaaatcaatccacaaatgatgcgcctg
cgcggtggtgcggacatcttggtggccactcccggtcgcctgctggacctttacaatcag
cgcgcgatcaaattcgatcgcctggaaacgctggtgttggatgaagccgatcgcatgctc
gatatgggttttattcacgacatcaaaaaaattctgcgcgtactgccagcgaagcgtcag
aacctgctgttctccgcgaccttctcgccggaaattcgcggcttggccaaaggcctggtg
aacgacccggttgaaatcgatgtggcgccgcgcaacagcaccaccaaaaccgtaatgcaa
aagctgcatccggtggataagtcccgcaaggcatctttgctgtgtcacctgatcaaggaa
aatgactggcaccaggcactggtcttcagccgcaccaagcacggtgccaaccgtctggcc
aagcaattggaacagcatcgtattcctgcggcggcgattcacggcaacaaaagccagaat
gcgcgaactaaagcactggcagattttaaaaatggcaaggtgcagattctggtggccacg
gatatcgccgcgcgcggtatcgacatcgaccagttgccgcaagtggtaaacttcgatctg
cccaatgtgccggaagattatgtgcaccgaattggtcgtaccggtcgtgccggcgcatcc
ggacacgcggtatctctggtgtctgccgacgaaatcaagcagttgcgtgatatcgaaaga
ctgatccagaagccgatcgagcgtgaagaaattgagggctttgaaccggaccacgtggtg
ccggaatccggcggcaaagtcggcaaaggttcacaggttcgccgcggcggtagtgggcgc
agcaagtcgggcaacggcaaggctggcggtaacaaaccttccggcaataagtctggtgga
aacaagccgtctgggaatcgtagcgcttccagcaaccgcgccaatggtaatcattcggaa
ggtcgcaacggcaatgagcgcaacggcaatggccgcagtggcaacagccgttcaggtaat
cgtgctgccaatggtaatagcaatggcaatacggcggccaagccggggcagcgccgtcgc
cgcccacaacgccgtaccgagtcggcgtaa
DBGET
integrated database retrieval system
