Microbulbifer agarilyticus: Mag101_04105
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Entry
Mag101_04105 CDS
T04709
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
maga
Microbulbifer agarilyticus
Brite
KEGG Orthology (KO) [BR:
maga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maga03016
]
Mag101_04105
Enzymes [BR:
maga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mag101_04105
Transfer RNA biogenesis [BR:
maga03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mag101_04105
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_pol_A_exoN
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AQQ66910
UniProt:
A0A1Q2M2L2
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All DBs
Position
999249..1000409
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AA seq
386 aa
AA seq
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MADSFNAESFSAEDKQLVDATPIWVDSDEQLVELCARWRTQSAIALDTEFMRSRTFYPQP
ALVQVGDGKHCYLIDNLAISNQEPLKELLQDTRVIKIMHSCSEDLETLERLLGVIPDPIF
DTQIAAAISGMGAGLGYAATVSELLQIDLPKSETRSDWLQRPLSDSQKNYAALDVAWLPL
VYGILVKRLREQERLDWLWEDCTAMVAAARQPESPELYYCKVKGAWRLRQNQLAVLQDLC
AWREREARVRDMPRNHLIKENVCMALAQNMPKYLATLAQPGLEGKTLRRYGEKLLEIISS
AAEREDLPARLSQPLNREQGEVLKLLRKKVTELAETAGLPPEILVRKKELEVLVQAQQPI
LEGRLTGWRRAVVGEPLLQELKELKV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcatttaacgctgagtcattcagcgcagaagacaagcagctggttgatgcc
acgccgatttgggtcgacagcgacgaacagttggtggagttgtgtgcgcgctggcgcacc
cagagtgccattgcgctggataccgagttcatgcgcagccgcaccttttatccacagcca
gcactggtgcaggtgggcgacggtaaacactgttacctgatcgataacctcgccatttcc
aaccaggaacctttgaaagaactactgcaagacacacgcgtgatcaaaatcatgcactcc
tgcagtgaggatctggaaacgctggaacgcttgctcggtgttattcccgacccaattttt
gatacccaaatcgccgcggcaatcagcggtatgggcgcggggttggggtatgcggcaacc
gttagcgagctcctgcagatcgatttgccgaaaagtgaaacccgctccgactggctgcag
cgcccgctcagcgattcgcaaaaaaactatgccgcactggatgtggcctggttgccgttg
gtatacggcatattggtaaaacgcttgcgcgagcaggaacgtctcgattggctttgggag
gattgcacggccatggtagccgcggcgcgccagcctgagtctcctgaactttactactgc
aaggtaaagggtgcctggcggctgcgccagaaccagcttgcagtattgcaggacctttgt
gcctggcgtgagcgtgaagcgcgcgtgagagacatgccgcgcaaccacctgattaaagaa
aatgtgtgcatggcactcgcccagaatatgcccaagtacctggcgacgctggcgcaaccg
gggctcgaaggaaagaccttgcggcgctatggcgaaaaattgctggaaattatttctagt
gcggccgaacgcgaggaccttcctgctcggctgtcgcagcctctcaaccgcgagcagggc
gaagtcctgaaactattgcgtaagaaggtcaccgagctggcggaaacagcgggactgcct
cccgaaattctggtgcgcaaaaaagagctggaagtactggtgcaggcccagcagccaata
ttggaagggcgccttaccggttggcgccgcgcggtagtgggcgagccactactgcaagaa
ttgaaagagttaaaagtatga
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