Microbulbifer agarilyticus: Mag101_08915
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Entry
Mag101_08915 CDS
T04709
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
maga
Microbulbifer agarilyticus
Pathway
maga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mag101_08915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maga03019
]
Mag101_08915
03009 Ribosome biogenesis [BR:
maga03009
]
Mag101_08915
Enzymes [BR:
maga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Mag101_08915
Messenger RNA biogenesis [BR:
maga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mag101_08915
Ribosome biogenesis [BR:
maga03009
]
Prokaryotic type
rRNA processing factors
Mag101_08915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF4901
Motif
Other DBs
NCBI-ProteinID:
AQQ67746
UniProt:
A0A1Q2M519
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All DBs
Position
2170050..2173007
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AA seq
985 aa
AA seq
DB search
MKRMLINATQPEELRVALVDGQWLYDLDIENRTREQKKANIYKGKITRVEPSLEAAFVDY
GAERHGFLPLKEISREYFIKQPKDIEGRIKIKDVVKEGMEVIVQVDKEERGNKGAALTTF
MSLAGRYLVLMPNNPRAGGISRRIEGEERSDLRDALSSVEVPSGMGIIVRTAGVGRSGEE
LQWDLNYLLQLWTAIKKEADESKAPHFLFQESNVIIRAIRDYMRDDIGEVIVDENGAYQL
AAEFARQVMPNYANKVKLYDDSIPLFNRYQIESQIETAFEREVKLPSGGSIVIDVTEALI
SIDINSSRATKGGDIEETARTINLEAADEIARQLRLRDMGGLVVIDFIDMQSKSSQREVE
KRMEKALGMDRARVQVGRISRFGLLEMSRQRLRPSLGETTFRVCPRCSGTGTIRGTKSLS
LSILRLVEEEAKKERSAEIRAIAPVNVATYLLNEKRGAISDIESRNDTRVVVVPNADLET
PHFEVQRLRDDDSTTLETSYKISGSIEESLDKADEEPARPVAQPAVQQITHTAPAPTPPA
KPKAKAKPKAKSEEKPGLFSRLISAIAGLFGGEDEDSRKKHKKGKGRGKNYQQRNRSQRG
GRGRGRGNRGRGRDDQRSEERKEDTRSKRGDKRREDSDVAESARDSKREQGRDNTRGGEG
REGGQRRNRRRRGGDRRNEQQTAVAEADANNLEVAESSESGDEQQRPSRRPSNVRGRPQP
RRRGRRGGDQAQPLADATAAPEAAESKQGEAQAAKPEQPAQVESGAEAKPESRGARSDKP
RRQRKPRPPRAEQEQQPESPAAEVAAPKAEPEAVTPAPKQEATSAPEVQAPKAEQPAVEA
VAEVTEAPVEQAPVEVETAKAEVQETAPAEQPSESKPEAAEAQEAAPVADEEVATTVTEA
PVQEEPVQEAPVQEAPSATTGGKPTRASNDPRVNPKPLVDLQVVTKQLEVGELRPLDTAQ
PANIDHSPRALQRPANDPRVQVAEG
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaatgctgattaacgcgacccagccggaagagctgcgcgttgccctggttgat
ggccaatggctatacgacctggatatcgaaaatcgcacccgcgaacagaaaaaagccaat
atctacaagggtaaaattacccgtgtagagccctccctcgaagctgcatttgtggactat
ggtgctgagcgccacggcttcctgcccttgaaagaaatttcccgcgaatacttcatcaaa
cagcccaaagacattgagggccgcatcaaaatcaaggatgtggtcaaagagggcatggaa
gttatcgttcaggtcgacaaagaagagcgcggcaataaaggcgcagctctgacgaccttt
atgagcctggccggtcgctacctggttctgatgccaaacaacccgcgtgcaggcggtatt
tctcgccgtatcgaaggcgaagagcgcagcgatctgcgcgatgccctgtccagcgtggaa
gtaccttccggcatgggcatcatcgtccgcaccgctggtgttggccgcagcggcgaagag
ctgcagtgggacctcaattacctgttgcaattgtggaccgccatcaagaaagaagcggat
gagtccaaggcgccccacttcctgttccaggaaagcaacgtcatcatccgtgcgattcgc
gactacatgcgcgacgacattggcgaagtgatcgttgacgagaacggtgcttaccagctt
gcggccgaatttgctcgtcaggtcatgccgaactacgccaacaaggtgaagctctacgat
gacagcattccgctgttcaatcgctaccagatcgaaagccagatcgagaccgcctttgag
cgcgaagtgaaactgccatccggcggttccattgtgatcgatgtaaccgaggctctgatc
tctatcgatatcaactcctcccgcgccaccaaaggcggcgacattgaggagactgcgcgc
accatcaacctggaagctgcagacgaaatcgctcgccagctgcgcctgcgtgatatgggc
ggcctggtagtgatcgactttatcgacatgcagagcaagtcgagccagcgtgaagttgaa
aagcgcatggaaaaagcactgggtatggaccgtgcgcgagtacaggttggtcgcatctct
cgcttcggcctactggaaatgtctcgtcagcgcctgcgcccatccctgggtgaaaccacg
ttccgagtgtgcccgcgctgtagcggcactggtaccattcgcggcaccaagtcactctcc
ctgtccatcttgcgactggtcgaggaagaagcgaagaaagagcgtagtgctgaaattcgt
gcgattgcgccggttaacgttgccacctacctgctgaacgaaaagcgcggagcgatttcc
gacatcgagtctcgcaacgacacccgtgttgtagtggttcctaatgctgatctggaaacc
ccgcacttcgaagtgcagcgcttgcgtgatgacgactccaccacactggaaacctcttac
aagatttccggtagcatcgaggaatccctcgacaaggcggatgaagaaccggcccgtccg
gtagcacagccagcggtgcagcagattacccatactgccccggccccaacaccacctgcg
aagcccaaggccaaagcaaaacccaaagcgaagtctgaggaaaagccgggattgttcagc
cgcctgatcagcgcaatcgctggcctgtttggcggtgaagacgaagacagccgtaagaag
cacaagaaaggcaaaggccgcggcaaaaattatcagcagcgcaatcgcagccagcgcggc
ggacgcggacgtggtcgcggaaatcgcggcagaggtcgtgacgaccagcgcagcgaagag
cgcaaagaagacactcgtagtaaacgcggcgacaaacgccgtgaagacagcgacgtcgca
gaaagcgcgcgcgacagcaagcgtgaacaaggccgcgacaatacacgcggtggtgaaggc
cgtgaaggcggccagcgtcgcaatcgccgtcgtcgcggtggtgatcgccgcaacgagcag
caaactgcggttgctgaagctgatgcaaataacctggaagtggcagaaagcagtgaatct
ggtgatgagcagcagcgcccgtcacgtcgccccagcaacgtccgcggtcgcccgcagccc
cgtcgtcgcggtcgccgcggtggcgatcaggctcaaccacttgccgacgccacagccgca
ccagaagcagcagagtccaagcaaggcgaggcacaagcagccaaacctgaacaacctgca
caggtagaaagcggtgctgaagcgaagcctgaaagccgtggcgcgcgctctgataagccg
cgtcgtcagcgcaagcctcgcccgccgcgtgccgaacaggaacagcagccagaatcgcct
gcagcggaagtagctgcgcccaaggccgaaccggaagctgtgacgcccgcgcccaaacag
gaagccacttcagcacctgaagtccaggcccccaaggccgagcaaccagcggtagaagcg
gtagcggaagtaaccgaggctcccgtcgagcaagcgccagttgaggttgaaactgccaag
gctgaagtacaggaaactgccccagccgagcaaccaagcgaaagcaaaccagaagccgct
gaagctcaggaagctgctccggtagctgacgaagaagttgcgaccaccgtaacggaagca
ccagttcaggaagagccagtgcaagaagcgccagtacaggaagcgcctagcgcgactact
ggcggcaagcctacccgtgcgagcaacgacccgcgtgttaacccgaaacctctggttgat
ctgcaggttgtcaccaagcaactggaagttggtgagctgcgtccgctggataccgcgcaa
cccgcaaacatcgatcacagcccgcgcgcacttcagcgcccggcaaatgatccgcgtgtt
caggtagccgaaggctaa
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