Microbulbifer agarilyticus: Mag101_10405
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Entry
Mag101_10405 CDS
T04709
Name
(GenBank) RNAse R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
maga
Microbulbifer agarilyticus
Brite
KEGG Orthology (KO) [BR:
maga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maga03016
]
Mag101_10405
Enzymes [BR:
maga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Mag101_10405
Transfer RNA biogenesis [BR:
maga03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mag101_10405
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AQQ68001
UniProt:
A0A1Q2M5P0
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All DBs
Position
2522265..2524214
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AA seq
649 aa
AA seq
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MLNADALKQLSQLKSDIRSTKEFAEGRVRGANGKFGFVVLDDGREAFLPPAEMDRVFPGD
RVKVSLTEEDKGKLSAELDSLISTELKYLVGQYVQRGQGHFIQPSEHGFSRWIFLPPKAR
GKAQPGEFIACSISRHPFKDGKSQAKVESVIGKPDMAGIEHAFVVAQHRLPNTFSKGALE
QAEAIPAQLESICTDRKDLSELGFVTIDSESTRDMDDAIAITKTDAGWTLHIAVADPSSL
IEAGSPLDKDALARANSVYLAGETLPMLPAGLCENSFSLLEGQLRPALVMHIVVSEDGAL
NGFEYEFAAIRSQHKLSYSQVAQYIDGDAAAVPETQHQALSELNALSKARAQYRSGHSLV
MEDRPDYDLILNEKRKIERIEKQERTSAQRMVEEAMLAANISAGGKLAELGAGCFSIHLG
FRDERMTEIRALLKDVMPEYAEQDLHQLDVYLKLVKTLEADEDAEKKNTLAVLKRMLRPG
ELSGNAAAHLGLGIAHYATVTSPIRKFNDLHNHRVLRAAADQQTLPTLADEHGEALQQSV
TTGRQADRALQQWLYCQYLENKIDQTFTGKITLVNGAGIGVRLDDNGINGFVRFNSKKNP
FDFDGKRLRITRGEEQFQLDQEVRVKVSAVDTDKRRIAFELVTETAASE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacgccgatgccctcaaacagctgtcccagctgaagtccgatatccgctccacc
aaagaatttgccgaaggacgcgtacgcggcgccaacggtaaatttggctttgtggtactg
gatgacgggcgcgaggctttcctgcccccagccgaaatggatcgagttttcccgggcgac
cgcgttaaggtgagcctgaccgaagaagataagggcaaactgtccgcggagctggatagc
ctgatctccaccgaactgaagtacctggtgggccagtatgtacaacgtggtcagggtcac
tttatccagcccagcgagcacggcttttcgcgctggatctttttgccgcccaaagcccgc
ggcaaggcgcaaccgggggagttcatcgcctgtagcatttcccgccacccgttcaaagac
ggtaagtcccaggcaaaagtagaaagcgtaatcggcaagcccgatatggccggaatcgag
cacgcctttgtggtcgcgcaacaccgcctgcccaacacgtttagcaaaggtgccctcgag
caggcagaagccattcccgcgcagctggagagcatctgcacagaccgcaaggatctttcg
gagcttggttttgtcaccatcgattctgaaagcacccgcgatatggacgatgccatcgcg
attacgaaaaccgacgcaggctggactctgcacatcgccgtagccgacccttccagtctg
atcgaagccggcagcccgctggacaaagacgcgcttgcgcgggccaacagtgtgtatctc
gccggcgaaaccctgccaatgttgcctgcaggtttgtgcgagaacagtttctccctgctg
gaaggccagctgcgccctgctctggtgatgcatattgtggtatccgaagacggcgcgctg
aacggtttcgaatacgagtttgccgcgatccgctcccagcacaagctgagctatagccag
gttgcccagtacatcgatggcgatgccgctgcagtgccagaaacccagcatcaggccctt
agtgaactgaacgccctcagtaaagcgcgtgcacagtaccgctctggccactctctggta
atggaagaccgcccggactacgacctgattctgaatgaaaagcgcaagatcgagcgcatc
gaaaagcaggagcgtacttctgcccaacgcatggttgaagaagccatgctggccgcgaat
atttcggcgggcggcaagctcgccgaactcggtgccggctgtttctccatccatctgggc
ttccgcgacgaacgcatgaccgagatccgcgccctgctgaaagacgtgatgccggagtac
gcagagcaggacctgcaccagctcgacgtctacctcaagttggtaaaaacccttgaagcc
gatgaggatgcagagaagaagaatacgctggcggtgctcaaacgcatgctgcgcccaggc
gaactgtccggcaatgccgccgcccacctcggcctgggcattgcccactacgccaccgtg
acctcgccgatccgcaagttcaacgacctgcacaaccaccgggtactgcgtgccgctgct
gatcagcaaaccctaccaaccctggccgacgaacacggtgaagccctgcagcaaagtgtc
accactggccgccaggcagaccgcgccctgcaacagtggctgtactgccagtatctggaa
aacaaaatcgaccagacctttactggcaaaatcaccctggtcaacggtgcgggtatcggc
gtacgcctggacgacaacggcatcaatggatttgtgcgctttaacagcaaaaagaatcca
ttcgatttcgacggcaagcgcctgcgcattacccgcggagaagagcagttccagctggat
caagaagtgcgcgtaaaagtaagcgccgtagatactgataagcgacgcattgcgtttgaa
ctggttacggaaaccgcggctagcgagtaa
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