Microbulbifer agarilyticus: Mag101_14910
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Entry
Mag101_14910 CDS
T04709
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
maga
Microbulbifer agarilyticus
Pathway
maga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mag101_14910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maga03021
]
Mag101_14910
03400 DNA repair and recombination proteins [BR:
maga03400
]
Mag101_14910
Enzymes [BR:
maga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mag101_14910
Transcription machinery [BR:
maga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mag101_14910
DNA repair and recombination proteins [BR:
maga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mag101_14910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AQQ68782
UniProt:
A0A1Q2M9A1
LinkDB
All DBs
Position
complement(3552800..3557029)
Genome browser
AA seq
1409 aa
AA seq
DB search
MKDLLNLVKAQDQLEEFDAIRIGLASPDTIRSWSYGEVKKPETINYRTFKPEREGLFCAK
IFGPVKDYECLCGKYKRMKHRGIICEKCGVEVTKAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVTDPGMTTLERGQLLNDEQYFEAMEEFADEFEAKM
GAEAIQELMNDIDLPQEIQRLREEIPATNSETKIKKLSKRLKLLEAFYKSGNKPEWMIMQ
ALPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHQCGLPKKMALELFKPFIFGKLEARGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTIEAQLES
RALMMSTNNILSPANGEPIIVPSQDVVLGLYWMTRERVNDKGEGMSFSDIKEVSRAFYAK
QVGLQAKIKVRIDETVIGEDGEKQVTRTVYDTTVGRALLWNIVPEGLPFELVNQPMKKKA
ISRVLNECYRKVGLKATVIFADQLMYTGFDFSTKSGSSIGVNDFEIPAAKADLIATAEAE
VKEIESQFASGLVTAGEKYNKVIDVWSRTNDKVTQAMMAGIKKEPVVDREGKDTEQDSFN
SVYMYADSGARGSEAQIRQLAGMRGLMARPDGSIIENAITANFREGLSVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITEIDCGTDEGLTMTPVIEGGDVIESLGDRIL
GRVVARDVAKPGSEEIAVPAGTMIDEAWVERIEGMGIDEVMVRSAITCETAHGICAQCYG
RDLARGHRANPGESVGVVAAQSIGEPGTQLTMRTFHIGGAASRASAADSIQVKQGGTVRL
HNLKTVKTEAGNLVAVSRSGELAVADPAGRERERYKLPYGAIISVDEGSSIDGGQIVAKW
DPHTHPIITEVAGWVKLSGMEDGLSIRKQTDEITGLSSIEVIDPAERPAAGKDLRPAVTL
VDENGEELTLANSNAPAHYALPPRAILSLKDSDKVNVGDVIARIPQESGGTKDITGGLPR
VADLFEARKPKEPSILAEISGTVSFGKETKGKVRLQITPQDGKPLANGKDHYEVLIPKHR
QLTVFEGETVAKGEVISDGPSNPHDILRLKGVEELARYITNEIQEVYRLQGVGINDKHIE
TIVRQMLRKVEILEMGDSEFIKGDQVEYQRVVEENERLRAEGKQPAQYERLLLGITKASL
ATESFLSAASFQETTRVLTEAAVTGKGDNLRGLKENVVVGRLIPAGTGLAYHAERKRKRT
QQQTQGFAEGPSAEEVEAALTEALKSSGE
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttgttaaacctggtgaaagcccaggatcagctcgaagaatttgacgctatc
cgtatcggtctggcatccccggacacgattcgctcctggtcctacggcgaagtgaaaaag
ccggagaccatcaactaccgtacgttcaagccagagcgtgaaggtctgttctgtgccaag
atttttggcccggtaaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcatcatctgtgagaagtgcggcgttgaagtaaccaaggcgaaagtacgccgtgag
cgtatgggccacatcgagctggccagcccggttgcgcacatctggttcctgaagtccctg
ccgtcccgtatcggcctgctgctggacatgaccctgcgcgacatcgagcgcgtactgtac
ttcgaatcttacgttgtgaccgatccgggtatgactaccctggagcgtggccagctgctg
aacgatgagcagtacttcgaagcgatggaagagttcgccgatgagttcgaagcaaaaatg
ggtgcggaagccatccaggagctgatgaacgacatcgacctgcctcaggaaattcagcgt
ctgcgcgaagagattccggcaaccaactctgaaaccaagatcaagaagctgtccaagcgc
ctcaagctgctggaagccttctacaagtccggcaacaagccggagtggatgatcatgcag
gctctgccggttctgccgccggatctgcgcccgctggtacctctggacggtggccgcttc
gcgacctctgacctgaacgacctgtaccgtcgcgtgatcaaccgtaacaaccgtctgaag
cgtctgctcgagctgaacgcgccggacatcatcgtgcgcaacgaaaagcgtatgctgcag
gagtctgtggacgcactgctggataacggccgtcgcggccgcgccattactggctccaac
aagcgcccgctgaagtctctggcagacatgatcaaaggtaagcagggccgtttccgtcag
aacctgctcggtaagcgtgtggattactccggtcgttccgtgatcgtggtaggtccgacc
ctgcgtctgcaccagtgtggtctgccgaagaaaatggccctcgagctattcaagccgttt
attttcggcaagctggaagctcgcggcctggcaaccaccatcaaagcggccaagaaaatg
gtcgagcgcgaagaagcggtggtatgggacattctcgacgaagtcattcgcgagcacccg
gtactgctgaaccgtgcaccgactcttcaccgtctgggcatccaggcatttgagccggta
ctgattgaaggtaaagcgatccagctgcacccgctggtgtgtgcggcgtacaacgccgac
ttcgacggtgaccagatggcggtacacgtaccgctgaccattgaagcgcagctggaatcc
cgcgcgctgatgatgtctaccaacaacatcctgtcaccggcaaacggtgagccgatcatc
gtcccgtctcaggacgtggtactgggtctgtactggatgacccgtgagcgtgtaaacgat
aaaggcgaaggcatgtccttctctgatatcaaggaagtcagccgtgccttctacgccaag
caggttggcctgcaggcgaagatcaaggttcgtatcgacgagaccgtgatcggtgaagac
ggcgagaaacaagtaacccgtaccgtatacgacaccactgtcggccgcgcgctgctgtgg
aacatcgtaccggaaggcctgccatttgagctggttaaccagccgatgaaaaagaaggcg
atctcccgcgtactgaacgagtgttaccgtaaggttggtctgaaggccaccgttatcttc
gctgaccagctgatgtacaccggcttcgacttctccaccaagtccggttcttccattggt
gtgaacgacttcgagatcccggcagccaaggctgacctgattgcgactgcagaagcggaa
gtaaaagagatcgaaagccagtttgcctccggtcttgtaaccgcgggtgagaaatacaac
aaggtaatcgacgtttggtctcgtaccaacgacaaagttacccaggcgatgatggccggt
atcaagaaagagccggttgtggatcgcgagggtaaggataccgagcaggactccttcaac
tccgtatatatgtacgctgactcaggcgcacggggctctgaagcgcagattcgtcagctg
gccggtatgcgtggcctgatggcgcgtccagatggctcgattatcgaaaacgccattacc
gcgaacttccgtgaaggtctgagcgtactgcagtacttcatctcgacccacggtgctcgt
aaaggtctggcggataccgcactgaaaaccgcgaactccggttacctgacccgtcgtctg
gtagacgtggcgcaggatgtggtaatcaccgaaatcgattgtggtaccgacgaaggtctg
accatgacgccggtgatcgagggtggtgacgttattgaatccctgggtgaccgtatcctg
ggccgagtggttgcgcgcgacgtagccaagcctggcagtgaagaaatcgctgtgccggcc
ggcaccatgatcgacgaagcctgggtagagcgtatcgagggcatgggcatcgatgaggtt
atggtgcgttccgccattacctgtgagacggctcacggtatctgtgcacagtgttacggc
cgtgacctggcgcgcggtcaccgcgcgaacccgggtgagtctgtgggcgttgttgccgca
cagtccattggtgagccgggtacccagctgaccatgcgtaccttccacatcggtggtgcg
gctagccgtgcttctgcggcggacagtatccaggtgaaacagggcggtaccgtacgcctg
cacaacctgaagaccgtgaaaaccgaagcgggcaacctggttgcggtatctcgttccggt
gagctggcggttgccgaccctgccggtcgtgaacgtgagcgctacaagctgccttatggt
gcgatcatcagcgttgacgaaggttccagcatcgacggtggccagatcgtggccaagtgg
gatccgcatactcacccgatcatcaccgaggttgccggttgggtgaagttgtccggcatg
gaagacggtctgtctattcgcaagcagactgatgaaatcaccggcctgtcttccattgaa
gtgatcgatccggctgagcgcccggcggcgggtaaagacctgcgtccggctgtgaccctg
gtggacgagaacggtgaagagctgactctggccaactccaacgcaccggcgcactacgca
ctgccgccgcgcgcgatcctgagcctgaaagacagcgacaaggtgaacgttggtgatgta
atcgcacgtattccgcaggaatccggcggtaccaaggacatcaccggtggtctgccgcgc
gttgccgacttgttcgaagcgcgtaagccgaaagagccgtccatcctggcggaaatctcc
ggtaccgtttccttcggtaaagagaccaaaggcaaggttcgtttgcagattaccccgcag
gacggcaagccgctggccaatggcaaggatcactacgaagtactgattccgaagcaccgt
cagctgaccgtgtttgaaggtgaaaccgtagcgaagggtgaggttatctccgatggcccg
tccaacccgcacgatattctgcgtctgaagggcgtggaagagttggcgcgctacatcacc
aatgagatccaggaggtttaccgcctccagggtgtaggcattaacgacaagcacattgaa
accattgtgcgtcagatgctgcgtaaggttgaaatcctcgagatgggcgactccgagttc
atcaaaggcgaccaggtggaataccagcgcgtggtggaagagaacgagcgtctgcgtgcc
gaaggcaagcagccagctcagtacgagcgcctgctgctgggtatcaccaaagcgtctctg
gcgaccgagtccttcctgtccgcggcctccttccaggagaccacccgcgtactgaccgaa
gcggcggtaaccggtaagggtgacaacctgcgcggcctgaaagaaaacgtggtagtgggt
cgtctgatcccggccggtactggccttgcctaccacgctgagcgcaagcgcaagcgcacc
cagcagcagactcaaggcttcgccgaaggtccttctgcagaagaggtggaagcggcgctg
accgaagccctgaaatcttccggggaataa
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