Magnetospirillum sp. ME-1: WV31_04420
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Entry
WV31_04420 CDS
T04817
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
magn
Magnetospirillum sp. ME-1
Pathway
magn03030
DNA replication
magn03410
Base excision repair
magn03420
Nucleotide excision repair
magn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
magn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WV31_04420
03410 Base excision repair
WV31_04420
03420 Nucleotide excision repair
WV31_04420
03440 Homologous recombination
WV31_04420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
magn03032
]
WV31_04420
03400 DNA repair and recombination proteins [BR:
magn03400
]
WV31_04420
Enzymes [BR:
magn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WV31_04420
DNA replication proteins [BR:
magn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
WV31_04420
DNA repair and recombination proteins [BR:
magn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
WV31_04420
NER (nucleotide excision repair)
GGR (global genome repair) factors
WV31_04420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
ARJ64964
UniProt:
A0A1W6CJE8
LinkDB
All DBs
Position
995383..998160
Genome browser
AA seq
925 aa
AA seq
DB search
MTAPRHVYLIDGSGFIFRAFHGLPPMTRADGTPVNAVYGFTTMLMKLLSDTDADHVAVIF
DSSRKTFRSDIYPEYKAHRPPAPEELVPQFPLVREATRAFDLPAIELEGFEADDLIATYA
RLGLEAGARVTIVSSDKDLMQLVGPGVEMYDPMKNRAIGEAEVREKFGVPPDKVVDVQAL
CGDSSDNVPGVPGIGVKTAAQLIEEYGDLDTLLARAGEIKQPKRRETLIANAELARISRE
LVRLRADAPVPVPLAELDVKPPAPDKLAAFCAAQGFKSLMGRLGAKAPTAPTATRAVAAA
APAEAPSLPPRIETAYELVTDLATLDRWIAKATETGLVGFDTETTGLDPLRAKLVGVSLA
VAPGRACYIPVMHSPAQAQGDLLGGPSADAPKILPAEQTLARLAPLLADPSVLKVGHNIK
YDMQVMAGLGLGVEAFDDTMLLSYVLDGASHGHGLDELCLLHLGHTNIPFSAVCGTGRNQ
VTFDRVPLDKACAYAAEDADMTLRLHGLLKPRLLADRMVTVYETLERPLVPVISAMERDG
IKVDRAQLMGLSEDFGRRLGELETEVVALNNGEAFNLGSPQQLGKVLFETLGLPGGKKTK
TGQWATGADVLEELAPLHPLPARLLDWRMLSKLKGTYTDALVAQINPATGRVHTSYALAA
TTTGRLSSSDPNLQNIPIRTEEGRKIRHAFVAEPGRKLISADYSQIELRLVAHVAEIEGL
RDAFAKGEDIHAITASQVFGVPTEGMDPALRRRAKAINFGIIYGISAFGLAAQLGIPQGE
AKAYIEAYFARYPEIRAYMERTKEEARENGFVTTLFGRKVFTPGIKDKNGAMRAFAERAA
INGPIQGGAADIIKRAMIRLPAALGAEGLKARLLLQVHDELVLEAPEAEAEATVAVVKRV
MEAAATLSVPLLVEAGIADSWDAAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgctccccgccacgtctacctgatcgacggctcgggcttcatcttccgggccttc
cacggcctgccgcccatgacgcgggccgacggcacgccggtcaatgccgtctacggcttc
accaccatgctgatgaagctgctgtcggacaccgacgccgaccacgtggcggtgatcttt
gattcgtcgcgcaagaccttccgcagcgacatctaccccgaatacaaggcccaccgcccg
ccggcgcccgaggaactggtgccccagttccccctggtgcgcgaagcgacgcgggccttc
gacctgccggccatcgagctggaaggcttcgaggccgacgacctgatcgccacctatgcc
cgccttggcctggaggccggagccagggtcaccatcgtctcgtccgacaaggatttgatg
cagctggtggggcccggcgtcgagatgtacgaccccatgaagaatcgcgccatcggcgag
gccgaagtgcgggaaaagttcggggtgccgccggataaggtggtggacgtccaggcgctg
tgcggcgattcgtccgacaacgtgcccggcgtgccgggcatcggggtcaagaccgccgcg
cagttgatcgaagaatacggcgatctcgacaccctgctggcccgcgccggcgagatcaag
cagcccaagcgccgcgagaccctgatcgccaatgccgaactggcccgcatctcgcgcgaa
ctggtgcgcctgcgcgccgacgccccggtgccggtaccgctggccgagttggacgtcaag
ccgccggcgccggacaagctggccgccttttgcgccgcccagggctttaagtccctgatg
ggccgcctgggcgccaaggctcccaccgcgcccaccgccacgcgggcggttgcggccgcc
gctccggccgaggctccgtccctgccgcccaggatcgagaccgcctacgagctggtcacc
gatctggccaccctggatcgctggatcgccaaggccaccgagaccggattggtgggcttc
gacaccgagaccaccggcctcgaccccttgcgcgccaagctggtgggcgtgtccctggcc
gtggcgccgggccgggcctgctacatcccggtgatgcattccccggcccaggcccagggc
gacctgctgggcgggccgtccgccgacgccccgaagatcctgcccgccgaacaaaccctg
gcgcggctggcgccgctgctggccgatccttcggttctgaaggtcgggcacaacatcaag
tacgacatgcaggtgatggccggtctgggcctcggggtcgaggccttcgacgacaccatg
ctgctgtcctacgtgctggacggggccagccacggccatggtctggacgagctatgcctg
ctgcatctcggccacaccaacattcccttctccgcggtgtgcggcacgggacgcaaccag
gtgaccttcgaccgggtgcccctggacaaggcctgcgcctacgccgccgaggacgcggac
atgacgctgcgcctgcacggcctgctgaaaccccgccttttggccgatcgcatggtcacc
gtctacgagacgctggagcgtccgctggtgccggtgatcagcgccatggagcgcgacggc
atcaaggtggaccgcgcccagctgatgggattgtccgaggatttcggccgccgcctgggc
gagctggagaccgaggtggtggcgctgaacaacggcgaggccttcaacctgggctcgccg
cagcaattgggcaaggtgctgttcgagacccttggccttcccggcggcaagaagaccaag
accggccagtgggccaccggcgccgacgtgctggaggaactggcccccctgcaccccctg
cccgcccgcctgctggactggcggatgctgtcgaagctgaagggcacctataccgacgcg
ctggtggcgcagatcaacccggccacgggccgcgtccacacctcctatgcactcgccgcc
accaccaccgggcggctgtcgtcgtccgaccccaacctgcagaacatccccatccgcacc
gaggaagggcgcaagatccgccacgctttcgtggccgagccgggccggaagctgatcagc
gccgactattcccagatcgagctgcgcctggtcgcccacgtggcggagatcgagggcctg
cgcgacgccttcgccaagggcgaggacatccacgccatcaccgcctctcaggtgttcggc
gtgccgacagaaggcatggacccggcgttgcgccgccgtgccaaggccatcaatttcggc
atcatctacggcatcagcgcctttggcctggccgcccagctgggcatcccccagggcgag
gccaaggcctatatcgaggcctatttcgcccgctatcccgagatccgcgcctatatggaa
cggaccaaggaggaggcgcgggaaaacggcttcgtcaccaccttgttcgggcgcaaggtc
ttcacgccgggcatcaaggacaagaacggcgccatgcgggccttcgccgagcgcgccgcc
atcaacggccccatccaggggggcgccgccgacatcatcaagcgcgccatgatccgcctg
cccgccgccttaggcgcggaggggctgaaagcccgattgctgctccaggtccatgacgaa
ctggtgctggaagcccccgaggcggaggccgaggccaccgtggcggtggtcaaacgcgtc
atggaagccgccgccaccctgtccgtgcccctgctggtggaagcgggcatcgccgacagc
tgggacgcggcgcactaa
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