Magnetospirillum sp. ME-1: WV31_04545
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Entry
WV31_04545 CDS
T04817
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
magn
Magnetospirillum sp. ME-1
Brite
KEGG Orthology (KO) [BR:
magn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
magn03400
]
WV31_04545
Enzymes [BR:
magn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WV31_04545
DNA repair and recombination proteins [BR:
magn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
WV31_04545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ARJ64987
UniProt:
A0A1W6CJF2
LinkDB
All DBs
Position
complement(1019259..1022723)
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AA seq
1154 aa
AA seq
DB search
MTDASALSLDADRRQRRAADAKASVWVAASAGTGKTKVLTDRVLTLLLAGTPPHKILCLT
FTKAAAAEMSNRIAGRLGQWATAQDEDLAGDLERLLGRLPSDDEMTGARRLFAALLDAPG
GMHMETIHAFCQSLLRRFPLEAGIAPHFQVMDDRDAGELLEAAKLEVLASARQGDGELGR
ALALVTGRVHETAFPELMGELTAERGRLERLFDRHGGVDGALAALRTRLGLDDGDTPDSL
LAWAADEAHFDGESLRAAVSALLTGSDSDAKRGEAMARWLADPAGRQDGFALWSAQFLTA
EGTIRKTLATKAVRDGFPGVEAAMLTEAERLLRLGEKLKAARILEATGALLTLGGALLES
YRRAKAVRALMDYDDLILSARDLLARPGVAPWVLFKLDGGIDHVLIDEAQDTNPDQWAVV
EKLTEEFFAGRGARETLRTVFAVGDAKQSIYSFQRADPREFERMREAFAAHVPAAGGTWD
EVALNLSFRSAPAVLDAVNAVFAPGRPGRDGVAGDEDITHLPHRSGQAGRVEVWPAVEPR
PADEAPAWKPPVERIRGDSPRTRLARLVAARIRAMIDGEILDSKGRPVRAGDVLVLVRRR
GGFVEDLVRELKTRKVEVAGADRMVLTEQMAVMDLMALGNFLALPDDDLTLATVLKGPLV
GLSEEQLFTLAHHRGRDVGLWEALRQGVADEGGVFESAFRRLSDLLAQADRVSPHTLYAR
VLGPLGGRKRLLARLGLEAEDAIDEFMALTLAFERAHPPSLQGFLHWLEAGALEIKRDLE
QGGRDAVCIMTVHGSKGLQAPIVFLPDTMQVPTRSSRLLWLGDGEDELPAWPPRAEDMDA
VCRQGSQARKSAREREYRRLLYVAMTRAEDRLVVCGWRGLKAAPETCWHALVSDALAPTA
LEFADPFLAGSGETADGPVLVLANAQSAPVEKGRAAGPGERPPEALPDWALVPAEAEPVP
PRPLAPSRPEGEEPPVRSPLAELDGRPRWQRGKLIHRLLQTMPDLPPSERSRAMLRFLSR
PSFGLETAERLGIANEVSDILDHPGLGVLFGPGSRAEVPLVGRIGNRVVSGRVDRLSVSE
TEVIVADYKTNRRPPASADEVPELYVRQMAAYRLALACIYPRHRVRCVLVWTDGPRLTEI
EPARLDDALAGLVE
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgcctcggcgctttctctcgacgccgaccggcggcagcgccgcgccgccgac
gccaaagccagcgtctgggtggcggccagcgccggcaccggcaagaccaaggtgctgacc
gaccgggtgctgaccctgctgctggccggcacgccgcctcacaagatcctgtgcctgacc
ttcaccaaggccgccgccgccgagatgtccaaccgcatcgccgggcggctgggccagtgg
gcgacggcgcaagatgaggacttggccggggatctggagcgcctgctgggccgcctgccc
tcggacgacgagatgaccggggcgcgcaggctgttcgccgcgctgctggacgcgccgggc
ggcatgcacatggagaccatccacgccttctgccagtcgctgctacgccgtttccccttg
gaggccggcatcgcgccgcacttccaggtgatggacgaccgcgacgccggcgaattgctg
gaggccgccaagctggaggtgctggccagcgcacggcaaggcgatggcgaactgggccgc
gccctggccctggtgaccggccgggtgcatgaaaccgcctttcccgagctgatgggggag
ctcaccgccgagcgcggacgcctcgagcggctgttcgaccgccacggcggagtggacggc
gccctggcggcgcttcgcacccggctggggctggacgacggcgacacgccggactccctg
ctggcctgggcggcggacgaggctcatttcgacggcgagtccttgcgcgccgccgtgtcc
gctttgctgaccggttcggactccgacgccaaacgcggcgaggccatggcccgttggctg
gccgatccggcggggcggcaggacggcttcgcgctgtggtccgcccagttcctgacggcc
gagggcaccatccgcaagaccctggccaccaaggcggtgcgcgacggcttccccggcgtg
gaggcggccatgctgaccgaggccgagcggctgctccgcctgggtgagaagctgaaggcc
gcccgcatcctggaggcgacgggagcgctgctgacgctgggcggcgcgctgctcgagtct
tatcgccgggccaaggccgtccgtgccctgatggattacgacgatctgatcttgagcgcc
cgcgacctgctggcccggcctggcgtggcgccctgggtgctcttcaaactggacggcggc
atcgaccacgtgctgatcgacgaggcccaggacaccaaccccgaccagtgggcggtggtg
gagaagctgaccgaggaattcttcgccggaaggggcgcgcgcgagacgcttcgcaccgtc
ttcgcggtgggggatgccaagcagtccatctattccttccagcgcgccgatccgcgcgag
ttcgagcgcatgcgcgaggccttcgccgcccatgtgcccgccgccgggggaacctgggac
gaggtggcgctcaacctgtccttccgctcggcgcccgccgtgctggacgcggtcaacgcc
gtgttcgccccgggccggccgggccgcgacggggtggccggggacgaggacatcacccat
ctgccccaccgttcgggacaggccgggcgggtggaggtgtggcccgccgtggaaccgcgt
cccgccgacgaggcgccggcctggaagccgccggtggagcgcatcaggggcgattcgccc
cgtacccggctggcccggctggtggccgcgcgcatccgcgccatgatcgacggcgagatt
ctggactccaagggccgcccggtgcgggccggcgacgtgctggtgctggtgcgccgccgg
ggcggtttcgtcgaggatctggtgcgcgagctgaagacccgcaaggtcgaggtcgccggc
gccgaccgcatggtgctgaccgagcagatggcggtgatggatttgatggcgctgggcaac
ttcttggctctgcccgacgacgacctgacgctggccaccgtgctgaagggaccgctggtg
ggcctctccgaggaacagctgttcaccctggcccatcatcgcggccgggatgtggggttg
tgggaggcgctgcgccagggcgtggccgacgagggcggcgtgttcgaatccgcctttcgc
cggctgtcggacctgctggcccaggccgaccgtgtctcgccccacaccctttacgcccgg
gtcctgggtccgctgggcgggcgcaagcgcctgctggcccgcctgggtctcgaggccgag
gatgccatcgacgagttcatggcgctgaccctcgccttcgagcgcgcccatccgccgtcg
ctgcagggcttcctccactggctggaggcgggcgcgctggagatcaagcgcgacctggag
caaggagggcgcgacgcggtgtgcatcatgaccgtgcacggctccaagggtctgcaggct
cccatcgtcttcctgcccgacaccatgcaggtgccgacccgctcgtcccggctgctgtgg
ctgggcgacggcgaggacgaactgcccgcctggccaccccgggccgaggacatggatgcc
gtctgccgccagggctcgcaagcccgcaaatcggcgcgcgagcgggaataccgccgcctg
ctctatgtcgccatgacacgggccgaggaccggctggtggtctgcggctggcgcggcctg
aaggcggcgcccgagacctgctggcacgctttggtgagtgacgccctggcgcccaccgcc
ctcgaattcgccgatcccttcctggccggaagcggcgagacggcggacgggccggtgctg
gtcctggccaatgcccagagcgctcccgtggaaaagggccgggccgccgggccgggggag
cgcccgcccgaggccctgccagactgggcgctggtgccggccgaggccgagccggtgccg
ccccgccccctggccccctcgcggcccgaaggagaagagcctcccgtgcgttcgcccctg
gccgaactggacggacgcccgcgctggcagcggggcaagctgatccaccggctgctgcag
accatgcccgatctgccgccatcggagcgctcgcgggccatgctgcgcttcctgtcgcgt
ccgtccttcggcctggagaccgccgaacgcctgggcatcgccaacgaggtttccgacatc
ctcgaccatccggggctgggggtgctgttcggtcccggctcgcgcgccgaggtgccgctg
gtcgggcggatcggcaaccgggtggtctcgggccgggtcgaccggctgagcgtgagcgag
accgaggtgatcgtcgccgattacaagaccaaccgccgcccccccgccagcgccgacgag
gtgccggagctttacgtgcggcagatggccgcctatcgtctggcgctggcctgcatctat
ccccgccaccgggtgcgctgcgtgctggtgtggaccgatggtccccgcctgaccgagatc
gaacccgcccgtctcgacgacgccctggccgggctggtggaatag
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