Magnetospirillum sp. ME-1: WV31_09475
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Entry
WV31_09475 CDS
T04817
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
magn
Magnetospirillum sp. ME-1
Brite
KEGG Orthology (KO) [BR:
magn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
magn03016
]
WV31_09475
Enzymes [BR:
magn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
WV31_09475
Transfer RNA biogenesis [BR:
magn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WV31_09475
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PV-1
Motif
Other DBs
NCBI-ProteinID:
ARJ65873
UniProt:
A0A1W6CM02
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All DBs
Position
2066233..2067432
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AA seq
399 aa
AA seq
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MPMISDTESLAAFCRRLKSAPFVTVDTEFMREKTYWPQLCLVQVAGPDEARAIDPLAPGM
DLAPLFELMADTNVLKVFHAARQDVEIFLHLADAIPTPIFDTQIAAMVCGFGDAVGYETL
ASQLAKARIDKSMRFTDWSMRPLSEKQVQYALADVTHLRVAYEKLVRKLERNGRIEWLAE
EMALLTEPGTYRVDPENAWRRLKPRSTSPRFLGVLKELAAWREREAQDRDLPRQRILRDE
TLTEIAAHHPTDTAELGRTRGIGKGLVEGKMGQAILEAVKRGMALPESECPKPGDRVDVP
KGLGPVVELLKVLLKMKCDEHGVAGKLIANSADIDAIAADDNADVPALHGWRRELFGEDA
LKLKHGRLGLGFCTDGRRLRTVPIEPVEACAEAEPAAAD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgatctccgacaccgagtcgcttgcggcgttctgccgccgactgaaatccgcc
ccgttcgtcaccgtcgacaccgaattcatgcgggagaagacgtactggccgcagctctgc
ctggtgcaggtcgccggccccgacgaggcacgcgccatcgatcccctggccccgggcatg
gacctggcgccgctgttcgagctgatggccgacaccaatgtcttgaaggtgttccacgcc
gcccgccaggacgtggaaatcttcctgcatctggccgacgccatcccgacccccatcttc
gacacccagatcgccgccatggtctgcggcttcggcgacgcggtgggctacgagaccctg
gcctcgcagttggccaaggcccgcatcgacaaatccatgcgcttcaccgactggtccatg
cggccgctttcggaaaagcaggtgcaatacgcgctggccgacgtcacccatctgcgcgtc
gcttatgaaaagctggtgcgcaagctggaacggaacggccgcatcgagtggctggccgag
gaaatggccctgctgaccgagcccggcacctatcgggtggacccggagaacgcctggcgg
cggttgaagccccgctccacctcgccccgcttcctcggcgtcttgaaggaactggccgcc
tggcgcgagcgcgaggcccaggaccgcgacctgccgcgccagcgcatcctgcgtgacgag
accctgaccgagatcgccgcccatcatcccaccgacaccgccgagctgggccgtacgcgc
ggcatcggcaagggcctggtggaaggcaagatgggccaggccatcctggaggcggtcaag
cgcggcatggccctgcccgaatccgaatgccccaagcccggtgaccgggtggacgtgccc
aagggcctgggcccggtggtcgagctgttgaaggtgctcttgaagatgaagtgcgacgag
cacggggtggcgggcaagctgatcgccaattccgccgatatcgacgccatcgccgctgac
gacaacgccgacgttcccgccctgcacggctggcggcgcgagctgttcggcgaggacgcg
ctgaagctcaagcacggccgcctgggcctgggcttctgcaccgacggacgccggctgcgc
accgtgcccatcgagccggtggaagcctgtgccgaggccgaaccggcggcggccgactga
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