Magnetospirillum sp. ME-1: WV31_12275
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Entry
WV31_12275 CDS
T04817
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
magn
Magnetospirillum sp. ME-1
Pathway
magn00300
Lysine biosynthesis
magn00470
D-Amino acid metabolism
magn01100
Metabolic pathways
magn01110
Biosynthesis of secondary metabolites
magn01120
Microbial metabolism in diverse environments
magn01230
Biosynthesis of amino acids
Module
magn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
magn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WV31_12275
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WV31_12275
Enzymes [BR:
magn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
WV31_12275
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Ortholog
Paralog
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ARJ66385
UniProt:
A0A1W6CNC6
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All DBs
Position
2637976..2639250
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AA seq
424 aa
AA seq
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MNHFHYSNGELFAEDVAIARIAREVGTPFYCYSTKTLERHYTVFAEALAAAGLDSTICFA
LKSNPNVAVVRTFAQLGAGADVVSEGELRQALAAGVPPARIVFSGVGKTRHELEFAVAKG
IFQINVESEPELEMLSEIAAARGQVMPIAIRVNPDVDAGTHAKITTGKKENKFGIEWTRA
REVYARAHTLPGVEPVAIACHIGSQLTELAPFREAFIRVRDLVAMLRADGIDIRRLDLGG
GLGVPYDDETPPEPKAYAQVIRETLGDLGCRFVFEPGRLLVGNAGIMVSSIIRVKEGSTR
TFLIVDAAMNDLARPSLYDAYHSIFPVAEPKAGAVLAEADVVGPVCETGDTFARQRRLPP
MRAGDLLAFGTAGAYGAAMSSTYNTRPLIPEVLVKGGGYAVIRARPSYEDMRSLESLPGW
LSDG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccattactcgaacggcgagctgttcgccgaggacgtcgccatcgcccgc
atcgcccgcgaggtcggcacgccgttctattgctactccaccaagacgctggaacggcac
tacaccgtgttcgccgaggcgcttgccgccgccgggctggactccaccatctgcttcgcc
ctcaaatccaatcccaacgtggcggtggtccgcacctttgctcaattaggggcaggcgcc
gacgtggtcagcgagggcgagctgcgccaggccctggccgccggggtgccgccggcccgc
atcgtgttctcgggcgtgggcaagacccggcacgagctggaattcgccgtggccaagggc
atcttccagatcaacgtggaatccgagcccgagctggagatgctgtccgagatcgcggcg
gcacgcggccaggtgatgcccatcgccatccgggtcaacccggatgtggacgccggcacc
cacgccaagatcaccaccggcaagaaggaaaacaagttcggcatcgaatggacgcgggcc
cgcgaggtctatgcccgcgcgcatacgctgccgggcgtcgagccggtggccatcgcctgc
cacatcggctcgcagctgaccgagcttgcccctttccgcgaagccttcatccgggtccgc
gatctggtggccatgctcagggccgacggcatcgacatccgccgcctggacctgggcggc
ggcctgggcgtgccctatgacgacgagaccccgcccgagcccaaggcctatgcccaggtg
atcagggagaccctgggcgacctcggctgccgcttcgtcttcgagcccggccgcctgctg
gtgggcaatgccggcatcatggtgtcgtccatcatccgggtgaaggagggcagcacgcgc
accttcctgatcgtcgatgccgccatgaacgatctggcgcggccctcgctctacgacgcc
taccactccatcttcccggtggccgagcccaaggccggcgccgtcctggccgaagccgac
gtggtcggcccggtctgcgagaccggcgacaccttcgcgcgccagcgccgcctgcccccc
atgcgggccggcgacctgctggccttcggcaccgccggggcctatggcgccgccatgtcg
tccacctacaacactaggccgctgattccggaagtgctggtcaaggggggcggctacgcg
gtgatccgcgcccggcccagctatgaggacatgcggtcgctggaaagcctgcccggctgg
ttgagcgatggctga
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