Magnetospirillum sp. ME-1: WV31_13875
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Entry
WV31_13875 CDS
T04817
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
magn
Magnetospirillum sp. ME-1
Pathway
magn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
magn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
WV31_13875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
magn03400
]
WV31_13875
Enzymes [BR:
magn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
WV31_13875
DNA repair and recombination proteins [BR:
magn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
WV31_13875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
PRKG1_interact
LUC7
Motif
Other DBs
NCBI-ProteinID:
ARJ66681
LinkDB
All DBs
Position
complement(2988326..2989837)
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AA seq
503 aa
AA seq
DB search
MNDEARPAPSNVPEYSVSELSAGLRRTVEDAFSFVRVRGEISGFKRHSSGHLYFSLKDAE
AVLDAVCWRGSASKLAIGPEDGMEVVATGRLTTYPGRSKYQMVVERMELAGQGALLKMLE
DRKKRLMAEGLFDPSRKRPIPFLPDVIGVVTSPTGAVIRDILHRLAERFPRRVLLWPVAV
QGEGAAAQVAAAIRGFNTLKPGGTVPRPDVLIVARGGGSLEDLMAFNEEIVVRAAADSEI
PLISAVGHETDTTLIDFASDLRAPTPTAAAEKTVPVRAELIATMADMGARMVGAMQRGME
DRRNRLSHTFRALPHPRRVMEDCARRLDERAERLANAPRILLERRRAELDRLGARLRHPR
EQLAEAGHKLTALSTRLDHAMKTVTAAERAANERRALQLEQSAARLIQSLPRLLDDKAKR
VAHAGQLLESFSYRKVLERGFAVVRDEHGAPVTSVTAAKPGTALGVEFADGKAGVRVEGA
APPPAPKTHRKPATPDGRQGSLL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaagcccgccccgccccctccaacgtcccggaatactcggtctcggaactg
tccgccggcctgcggcgcacggtggaggacgccttttcgttcgtgcgcgtccggggcgag
atttcgggcttcaagcgccattcctcgggccatctctatttctccctgaaggatgccgag
gcggtgctggacgcggtgtgctggcgcggctccgcctcgaaactggccatcggccccgag
gacggcatggaggtggtggcgaccgggcggctgaccacctatcccgggcgctccaaatac
cagatggtggtcgagcgcatggaactggccggccagggcgcattgttgaagatgctggag
gaccgcaagaagcggttgatggccgaagggctgttcgacccctcgcgcaagcgccccatc
cccttcctgcccgatgtgatcggcgtggtgacgtcccccaccggggcggtgatcagggac
attctgcaccgcctggccgaacgcttcccccgccgggtgctgctgtggccggtggccgtc
cagggcgagggggcggcggcccaggtggcagccgccatccggggcttcaacacgctgaaa
ccgggcggaacggtgccgcgccccgacgtgctgatcgtggccaggggcggcggctcgctg
gaagacctcatggccttcaacgaggaaatcgtggtcagggcggcggcggactccgagatt
ccgctgatctcggcggtgggacacgagaccgacaccacgctgatcgacttcgcctcggat
ctgcgcgcccccacgcctacggcggccgccgagaaaacggtgccggtgcgcgccgaactg
atcgccaccatggccgacatgggcgcgcgcatggtgggcgccatgcagcgcgggatggag
gaccggcgcaatcgcctgtcccacaccttccgggccctgccccacccccgccgggtgatg
gaggattgcgcccggcggctggacgagcgggccgagcgcctggccaacgcgccccgcatc
cttctggagcgccgccgggccgagctggaccgcctgggcgcgcgcctgcgccatccccgt
gaacagctggccgaggccggacacaagctgaccgcgctttccacccgtctcgatcacgcc
atgaagacggtgacggccgccgagcgcgccgccaacgagcgccgcgccctgcaactggaa
cagtccgccgcccgcctgatccagtccctgccccgcctgctggacgacaaggccaagcgc
gtcgcccatgccggccaattgctggaaagcttctcctaccgcaaggtgctggagcgcggc
ttcgccgtggtccgcgacgaacacggcgcgccggtcacatccgttacggcggccaagccg
ggcaccgccttaggcgtagaattcgccgacggcaaggccggcgtcagggtcgagggagcc
gccccgccgccagcccccaagacccatcgcaagccggcaacgcccgatgggcggcaaggg
tcattgttgtaa
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