Magnetospirillum sp. ME-1: WV31_15805
Help
Entry
WV31_15805 CDS
T04817
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
magn
Magnetospirillum sp. ME-1
Pathway
magn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
magn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WV31_15805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
magn03400
]
WV31_15805
DNA repair and recombination proteins [BR:
magn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WV31_15805
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WV31_15805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
eIF3_p135
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ARJ67029
LinkDB
All DBs
Position
3398026..3400137
Genome browser
AA seq
703 aa
AA seq
DB search
MTRPLPFDFMERPPLPEGDVEFNLVSDYRPSGDQPQAIAELSAGVEADERDQVLLGVTGS
GKTFTMAHVIARTKRPALVLAPNKTLAAQLYAEMKGFFPDNAVEYFVSYYDYYQPEAYIP
RTDTYIEKDSAVNEQIDRMRHAATRSLLERRDVILVASVSCIYGIGSVESYARMTVALKV
GESIDRADLLKRLVELQYTRNDAAFERGTFRVRGDAVEIFPVHYEDRAWRLSLFGDEIEA
IHEFDPLTGEKTCSLSEVTVYPSSHYVTPRPTITQAIKGIKAELKETLERFHAEGKLLEA
QRLEQRTNFDLEMLETTGHCKSIENYSRYLTGRRPGDPPPTLFEYLPEDALLIVDESHVT
VPQIGGMYRGDYNRKSVLAEFGFRLPSCIDNRPLKFEEWELMRPQTVYVSATPGPWEMER
TGGVFTEQVIRPTGLIDPVCIVRPVEHQVDDLLAEVRQMARAGNRTLVTTLTKRMAEDLT
EYMHDNGVRVRYLHSDIDTLERIEIIRDLRLGAFDVLVGINLLREGLDIPECALVAILDA
DKEGFLRSKTSLIQTIGRAARNIDGRVILYADKMTESLEYALAETNRRREKQQAYNAEHG
ITPEGIRKAVSDVMESVYEADYVTVGTGESGIKHGVGHNLASVKADIEKRMKAAAADLEF
EEAARLRDELRRLEALDLGIEVDLGSKSRPRPTGKPKGKGRRR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcccgctgcccttcgacttcatggaacgtccgcctctgcccgaaggggacgtg
gagttcaatctggtctccgactaccggccctcgggcgaccagccccaggccatcgccgag
ctgtcggcgggggtcgaggccgatgagcgcgaccaggtgctgctgggggtgaccggctcg
ggcaagaccttcaccatggcccacgtcatcgcccggaccaaacgtcccgccctggtgctg
gcccccaacaagacgctggccgcccagctttacgccgagatgaagggcttcttccccgac
aacgcggtggagtatttcgtctcctattacgactactaccagcccgaagcctatatcccg
cgcaccgacacctatatcgagaaggattcggcggtgaacgagcagatcgaccgcatgcgc
cacgcggcgacgcggtccctgctcgaacggcgcgacgtgatcctggtggcgtcggtgtcg
tgcatctacggcatcggttcggtggaatcctatgcccgcatgacggtggcgctgaaggtg
ggcgaaagcatcgaccgcgccgaccttttgaagcggctggtggaattgcagtacacccgc
aacgacgccgccttcgagcgcggcaccttccgggtgcggggcgacgcggtggagatcttt
cccgttcactacgaggaccgcgcctggcgcctctccctgttcggcgacgagatcgaggcc
attcacgaattcgacccgctgacgggggagaagacctgctcgctgtccgaggtgacggtc
tacccctccagccactacgtgacgccccggcccaccatcacccaggccatcaagggcatc
aaggccgagttgaaggagacgctggagcgcttccacgccgagggcaagctcttggaggcc
cagcgcctggaacagcgcaccaatttcgatctggagatgctggagaccaccggccactgc
aagtccatcgagaactattcccgctacctcaccggccgcaggcccggcgacccgcccccc
accttgttcgagtacctccccgaggacgccctgttgatcgtcgacgagagccacgtcacc
gtgccgcagatcggcggcatgtaccggggcgactataaccgcaagagcgtgctggccgaa
ttcggcttccgcctgccgtcgtgcatcgacaaccggcccttgaagttcgaggaatgggag
ctgatgcggccccagaccgtctatgtctcggccacccccggcccctgggagatggagcgg
acggggggcgtgttcaccgaacaggtgatccgccccaccggcctgatcgatcccgtctgc
atcgtgcgccccgtcgagcatcaggtggacgacctgctggccgaggtccgccagatggcg
cgggcgggcaaccgcaccctggtcaccacgctgaccaagcgcatggccgaggatctgacc
gagtacatgcacgacaacggcgtgcgcgtgcgctacctgcattcggacatcgacacgctg
gagcgcatcgagatcatccgcgatctgcgcctgggggccttcgatgtgctggtgggcatc
aacctgctgagggaaggtctggacattcccgaatgcgccctggtggccattctggacgcc
gacaaggaaggcttcctcaggtccaagacctcgctgatccagaccatcgggcgggcggcg
cgcaacatcgacggccgcgtcatcctctatgccgacaagatgaccgaaagcctggaatac
gccctggccgagaccaatcgccggcgcgaaaagcagcaggcctacaacgcggagcacggc
atcacgcccgaaggcatccgcaaggcggtgtccgacgtcatggaaagcgtctacgaggcc
gattacgtcaccgtcggcaccggcgagtccggcatcaagcacggggtcgggcacaacctg
gcctcggtcaaggccgacatcgaaaagcgcatgaaggccgccgccgccgatctggaattc
gaggaggccgcccgtctgcgcgatgaattgcgccgcctcgaagccctggacctggggatc
gaagtggacctgggcagtaaaagcaggccgcgtcccaccggcaagcccaagggaaaggga
cgccggcgctga
DBGET
integrated database retrieval system
