Magnetospira sp. QH-2: MGMAQ_1763
Help
Entry
MGMAQ_1763 CDS
T03795
Name
(GenBank) Putative single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
magq
Magnetospira sp. QH-2
Pathway
magq03410
Base excision repair
magq03430
Mismatch repair
magq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
magq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MGMAQ_1763
03430 Mismatch repair
MGMAQ_1763
03440 Homologous recombination
MGMAQ_1763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
magq03400
]
MGMAQ_1763
DNA repair and recombination proteins [BR:
magq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MGMAQ_1763
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MGMAQ_1763
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MGMAQ_1763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
CCQ73666
LinkDB
All DBs
Position
1788189..1790009
Genome browser
AA seq
606 aa
AA seq
DB search
MLEVNDDTTSPAYLGVERSLRGKAWRQRPGDDRLAMTLAQRFHIPELAGRVLAARGVDLE
TASSYLNPTLRDLMPDPDGFKDMATGTTRLADALANGETIALFGDYDVDGATSAALLGRF
LRAVGGSPLLYVPDRLSEGYGPNGPALRRLREQGTTVAVTVDCGSTAFEALDVAAEVGLD
VVVIDHHAVEPKLPKAHAFINPNRLDEPPGQGHLAAVGVTFLFAVALNRRLRERDWYHDQ
RPEPDLMGLLDLVALGTVCDVVPLVGLNRAYVTQGLKVMAKRRNGGLTALADVAGVNEAP
GTYHAGFLLGPRVNAGGRVGQSDLGATLLGSDDPSVTREIAQRLDALNKERRDIEAMVLE
QALSQVEGEPEEHLFPSLVMAVGEGWHPGVVGIVASRLCERFNRPACVLAVEGEKATGSG
RSLPGMDLGAAVIAARQSEILLKGGGHAMAAGFTVDARRVDEFARFIAERLDRGMGDGGP
VPELNCDTVLSVGAAHGGTIAAIERAAPFGAGNSEPRFVLADVLITHAKIVGENHVRCTL
SGAAEGGRVNAMAFRSVDSELGQALLRHQGAAFHLAGHLRRDTWRGGNAVQFLIDDGVRV
AETRPR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgaggtgaatgacgacacgacttcgccggcttatctaggcgttgaacgctccttg
cggggcaaagcctggcgacaaaggccgggtgatgatcgtctggccatgaccctcgcccaa
agatttcatattccggaattggccgggcgggttctggccgcccgaggcgtggacctggag
accgcttccagctatctcaatccgaccctgcgcgacctgatgcccgacccggatgggttc
aaagacatggccaccgggaccacccgtcttgccgatgccctggccaatggcgaaaccatt
gccctgttcggggactatgacgtggatggggcgacctcggcggccctgctgggacgcttc
ctgcgggccgttggtgggtcacccttgctttatgtgccagaccgtctcagcgagggctat
ggccccaacggaccggccctgcgccgcctgagagagcaagggaccaccgtggcggtcacc
gtggattgcggctccacggccttcgaggccttggatgtcgcggcggaggttgggttggac
gtggtggtcatcgatcatcatgccgtggaacccaagctgccaaaggctcatgccttcatc
aatcccaaccggttggacgagccgccggggcaggggcatctggccgctgtcggggtgacg
tttctgttcgccgtcgccctgaaccggcggctgcgggaaagggattggtaccatgaccaa
cgcccggaaccggacctgatggggctgctcgacctggtggccctgggcacagtctgcgac
gtggtgccattggtgggactcaatagggcttatgtgacccaggggctgaaggtcatggcc
aagcggcgcaatggcggcctgaccgctctggctgatgtggccggggtcaatgaggcgccg
ggcacttatcacgccgggttcctcttgggtccgcgggtcaatgccggcggccgcgtgggt
cagtcggacctgggggcaaccctattggggagcgacgatccatccgtcacccgcgagatc
gctcagcgtctggatgccttgaacaaggagcgccgggatattgaggcgatggtattggaa
caggctctgagccaagtggaaggggagccggaagagcacctgtttccatctttggtgatg
gccgtgggcgaaggatggcatcccggcgtggtcggcatcgtggccagccgcctgtgtgag
cgtttcaaccgtcctgcctgtgtcctggccgtggagggggaaaaggccaccggctccgga
cgctccttgccgggcatggacctgggggcggccgtcatcgccgcccgtcagtcggaaatc
ctgctcaaaggcggcggtcatgccatggccgccgggtttacggttgacgcgcggcgggtc
gacgaattcgcgcgtttcatcgccgagcgtttggatcggggcatgggggatggggggcct
gttcccgaactcaattgtgacacggttttgagcgtcggggcggcccatgggggcaccatt
gccgccatcgagcgggcggcacccttcggcgcggggaattccgagccgcggttcgtgctg
gcggatgtgctgattacccatgccaaaattgtcggcgagaatcatgtgcgttgcacgctg
agtggggccgccgaaggcgggcgggtcaatgccatggcctttcgttccgtggacagcgaa
ttgggccaggccctgttgcgtcatcaaggcgcggccttccatctggccgggcatctgcgg
cgtgatacctggcgtggcggcaatgccgtgcagtttctgatcgatgacggcgtccgggtc
gcggaaacaagaccacgttaa
DBGET
integrated database retrieval system
