Magnetospira sp. QH-2: MGMAQ_1986
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Entry
MGMAQ_1986 CDS
T03795
Symbol
hupB
Name
(GenBank) DNA-binding transcriptional regulator, beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
magq
Magnetospira sp. QH-2
Brite
KEGG Orthology (KO) [BR:
magq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
magq03032
]
MGMAQ_1986 (hupB)
03036 Chromosome and associated proteins [BR:
magq03036
]
MGMAQ_1986 (hupB)
03400 DNA repair and recombination proteins [BR:
magq03400
]
MGMAQ_1986 (hupB)
DNA replication proteins [BR:
magq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MGMAQ_1986 (hupB)
Chromosome and associated proteins [BR:
magq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MGMAQ_1986 (hupB)
DNA repair and recombination proteins [BR:
magq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MGMAQ_1986 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
CCQ73881
LinkDB
All DBs
Position
complement(2012017..2012292)
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AA seq
91 aa
AA seq
DB search
MNKNDLVAAVASSTGLSKADAGKAVDSVFGAITSSLQGGQEVRLVGFGTFSVAARAASEG
RNPRTGEKIQIPASKQPKFKAGKSLKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaaacgatctcgtggcggctgtcgcaagcagcactggtctgtccaaagccgat
gccggcaaagccgttgattcggtttttggtgccatcacgtcttctcttcagggcggtcag
gaagtccggttggtcggtttcggtaccttcagcgtcgcggctcgcgccgccagcgaaggc
cgcaatccccgcaccggtgaaaagatccagattcccgcgtccaagcagccgaagtttaag
gctggcaagagcctgaaggacgccgtcaacggttaa
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