Magnetospira sp. QH-2: MGMAQ_3142
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Entry
MGMAQ_3142 CDS
T03795
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
magq
Magnetospira sp. QH-2
Pathway
magq03420
Nucleotide excision repair
magq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
magq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MGMAQ_3142 (uvrD)
03430 Mismatch repair
MGMAQ_3142 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
magq03400
]
MGMAQ_3142 (uvrD)
Enzymes [BR:
magq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MGMAQ_3142 (uvrD)
DNA repair and recombination proteins [BR:
magq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MGMAQ_3142 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MGMAQ_3142 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_22
DUF7185
MSSS
DUF3553
Motif
Other DBs
NCBI-ProteinID:
CCQ74978
UniProt:
W6KCW0
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All DBs
Position
3189390..3191669
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AA seq
759 aa
AA seq
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MTDPFDFTDDDPPAAAAPAPRPEPPFLRGLNDAQFEAVESLDGPVLVLAGAGTGKTRVLT
TRLANILARGRARPYEMLAVTFTNKAAREMRDRVAALLGTPVEGWWVGTFHALGARILRN
HAEAAGLRPNFTILDDDDQVRLIKQVLELHPVDDKRWPARVLLGAIQRWKDRGLTPDQVS
DAEGADLAEGRLVAIYKDYQQRLTDINAADFGDLLLLNLTLFQTKPDILKRYQQQFRYLL
VDEYQDTNIAQYLWLRLLAQGHRNICCVGDDDQSIYSWRGAEVGNILRFEEDFPGAAVIR
LERNYRSTSHILGAASGLITHNDGRLGKTLWTEESTGEKVRVVSVWDGATEARRIGRDIE
DLHRQGHSLEQMAVLVRAGFQTREFEERLITLGIPYRVIGGPRFYERQEIRDALAYLRVI
VQPDDDLAFERIVNLPKRGIGKAVMQTLHTHGRARRRSLHQVTLDLIDTDELRPKVRQTL
RGLMEDFERWRHQAAAIPHPELMGQVLDESGYTEMWKISNKPDGPGRLDNLKELVSGMEQ
FENLAEFLEHVSLVMENDSRDDTEKVSLMTLHGAKGLEFDTVFLPGWEEGLFPHQRALDD
GGMNGLEEERRLAYVGLTRARQRARISHAANRRIYNQWQSSLPSRFIEELPETHVDFNDE
TVQAQSRQFGFSDSWSRQSHGGFDSARQRRRRDPLVIEAQAQTTVETAPTQSSRYAPGDR
VRHRKFGEGTVVSAEGEKLVIDFGGSGTKKVVDSFVERA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccgtttgacttcaccgacgacgacccgcccgccgccgccgctccggcgccg
cgcccggaaccgccgttcctgcgcggcctcaacgacgcccagttcgaggccgtggaatct
ttggatgggccggtgctggtcctcgccggagccggaaccggcaagacccgggtgctgact
acccgtctggccaatatcctcgcccggggccgggcgcgaccctatgaaatgctggccgtg
acctttaccaacaaggcggcgcgggaaatgcgcgaccgggtggcggccctgctcggcaca
ccggtggagggctggtgggttggcacgttccatgccctgggcgcgcgcatcttgcgaaac
cacgccgaggcggccggactgcgacccaacttcaccatccttgacgacgatgatcaggtg
cgtctgatcaagcaggtccttgaattgcatccggtggatgacaagcgctggccagcccgg
gtgctgctcggcgccatccagcgctggaaggatcgcggcctgaccccggatcaggtgtcc
gatgccgagggcgccgatctggccgagggacgtcttgtggccatctacaaggactatcaa
caacgcctgaccgatattaacgccgccgacttcggcgacttgttgttactcaatctgacc
ctgttccagaccaagcccgatattctcaagcgctatcagcaacagttccgctatctgctg
gtggatgaatatcaagatacaaatattgcccaatacctatggctgcggctgctggctcag
gggcatcgcaacatctgctgcgtaggtgacgatgaccagtccatctattcctggcgcgga
gcggaggtcggcaacatcctgcgcttcgaagaggatttccccggcgccgcggtgatccgg
ctggaacgcaattaccgctccaccagccatatcctcggcgccgcttcggggcttatcacc
cacaacgacggacgcctgggcaagaccctatggaccgaagagagcaccggcgagaaggtg
cgggtggtttccgtgtgggacggtgcgaccgaggcccggcgtatcggtcgcgacattgag
gatctgcaccgccaaggtcattccctggagcaaatggcggttctggtgcgcgccggtttc
cagacccgcgagttcgaagaaagactgataaccctgggcattccttatcgggtcatcggc
ggcccgcgtttctatgaacgtcaggaaatccgcgatgctttggcttatctgcgggtgatc
gtgcaaccggatgacgacctggccttcgagcgcatcgtcaatctgcccaaacgcgggatc
ggcaaagcggtgatgcagactctgcatacccatgggcgcgcccgacgccggtccttgcat
caggtgaccctggacctgatcgacaccgatgaactgcgccccaaggtccgccagaccctg
cgcgggctgatggaggatttcgagcgttggcggcatcaggccgccgccatccctcacccg
gaactgatggggcaggtgctcgacgagtccggctatacggagatgtggaagatctccaac
aaacccgacgggccggggcggttggataatctcaaagaactggtctcgggaatggagcag
ttcgaaaacctggccgaattccttgagcatgtgtctctggtgatggaaaacgacagtcgc
gacgacaccgaaaaggtctccttgatgactctgcacggagccaagggactggagtttgac
acggtattcctgcccggttgggaagaaggccttttccctcatcaacgggccttggacgat
ggcggcatgaatggcttggaagaggaacggaggctggcctatgtgggtctgacccgggcg
cgacagcgagcgcggatctcccacgccgccaaccggcggatctataatcaatggcagtcc
agcctgccatcgcggttcatcgaggaactgcccgagacgcatgtggatttcaacgatgaa
accgtgcaagcgcaaagccgacagttcggcttcagtgattcctggtcccgccagtctcat
ggtggcttcgacagtgctcgccaacggcggcgacgggacccactggtcatcgaagcgcag
gcacaaaccaccgtcgaaacggccccgacccaatcgagccgctatgctcccggcgaccgg
gtgcgccaccgcaaattcggcgagggaacggtggtctccgccgagggcgaaaagctggtc
atcgacttcggcgggtcggggacgaaaaaggtggtggatagtttcgtggagcgggcgtga
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