Magnetospira sp. QH-2: MGMAQ_3742
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Entry
MGMAQ_3742 CDS
T03795
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
magq
Magnetospira sp. QH-2
Brite
KEGG Orthology (KO) [BR:
magq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
magq03016
]
MGMAQ_3742 (ligT)
Enzymes [BR:
magq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MGMAQ_3742 (ligT)
Transfer RNA biogenesis [BR:
magq03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MGMAQ_3742 (ligT)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
CCQ75549
UniProt:
W6KDU7
LinkDB
All DBs
Position
complement(3836562..3837098)
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AA seq
178 aa
AA seq
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MFRLFVGIPFPVSVQASLEGLCHGVPGVRWVQPHSFHMTLRFIGEVDEDVAEDLDAALAG
IHAPRFMMALSGVGCFDKRNKVKALWAGADKSSPLMHLFGKVESAVVRAGMPPEPRKFKP
HVTLARSRNLSLEQAAPFLESRSQYLSEAFEVSRFTLFRSHLSREGAFYEPLAEYPLT
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcctgtttgtcggcattccttttccggtctcggtgcaggcctcgcttgagggc
ctctgtcacggtgttcccggggtgcgctgggtacagccgcacagcttccatatgaccttg
cgctttatcggcgaagtggatgaggacgtggccgaggacctggacgccgctttggccggg
atccatgcaccgcgattcatgatggccctgtccggtgtcggctgcttcgacaagcgcaac
aaggtcaaagccttgtgggctggcgccgacaaaagctctcccctgatgcatctgtttggc
aaggtggaatcggcggtggtcagggccggcatgccgccggaaccgcgaaagttcaagcca
catgtaactttagcccggtccaggaacctgagcctggaacaggccgcgccctttctggaa
agccgctcgcaatacctatccgaggcgttcgaagtatcgcgcttcacgttgttccgcagt
catctgagccgcgaaggcgccttctatgagccgctggcggaatatcccctgacctga
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