Magnetospira sp. QH-2: MGMAQ_3800
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Entry
MGMAQ_3800 CDS
T03795
Name
(GenBank) putative DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
magq
Magnetospira sp. QH-2
Pathway
magq03030
DNA replication
magq03430
Mismatch repair
magq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
magq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MGMAQ_3800
03430 Mismatch repair
MGMAQ_3800
03440 Homologous recombination
MGMAQ_3800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
magq03032
]
MGMAQ_3800
03400 DNA repair and recombination proteins [BR:
magq03400
]
MGMAQ_3800
Enzymes [BR:
magq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MGMAQ_3800
DNA replication proteins [BR:
magq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MGMAQ_3800
DNA repair and recombination proteins [BR:
magq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MGMAQ_3800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
CCQ75606
LinkDB
All DBs
Position
3888851..3889870
Genome browser
AA seq
339 aa
AA seq
DB search
MKITGARIKAFLDSPPTAVRAVLVYGPDEGLIRERGLALVKTVVEDPKDPFRMVDLSGSD
LKTDPARLADEAAALSLTGGRRAVRIRGAADAQQKILASFLKNPVGDALIVVEAGELGAG
SSLRKLFEGQDNAAALACYGDDGRSLNQVIRESLGEQGLSADPDAMAYLANHLGSDRQVT
RSEIGKLALYMGTETRIGLADAMACVGDSGATSLDALLVALGNGDQAGLDQAVERVLTDG
GTPVGLLRLVNRHFQRLHLAAGHMAQGLPPDQAMKRLRPPVMFKIADAFRSQLTRWTPDR
LARAFELLVEAETDCKTTGLPAETVCRRTLMRIAQAGRR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaccggcgcacggatcaaggcttttttggattctccgccaacagccgtgcgc
gccgttctggtttatgggcccgatgaaggattgattcgcgagaggggtttggctttggtc
aagaccgtggtcgaagatcccaaagatccctttcgaatggtggatttgtccggatctgat
ctgaaaactgatccggcgaggctggccgatgaagcagccgccctttctttgacagggggt
cgacgggcggtgcgaatccgcggtgcggccgatgctcagcagaagattctggcttctttt
ttgaagaacccggtgggagatgcgctgatcgtggttgaagcgggggagctgggggcagga
tccagcttgcgaaaactgttcgaaggtcaggacaatgccgccgctttggcttgttatggg
gatgacggacgctctctcaatcaggtcatccgcgaatctctgggcgaacagggattaagc
gcagaccccgatgccatggcctatcttgccaatcatttgggttccgatcgccaggtgacc
cgctcggaaattgggaagttggctctttatatgggcactgaaacccgtattgggctggcc
gatgccatggcttgtgtcggcgatagtggcgccacgtcacttgatgccttgttggtcgcc
ctcggcaacggcgatcaggcgggattggatcaggcggtggaacgggtgttaaccgacggc
gggaccccagttggcttactgcgattggtcaatcgtcattttcaacgcttacatttggcg
gctggccatatggcgcaaggcctgccgccggatcaagccatgaagcgtttgcggccaccg
gtgatgttcaagattgccgatgcgttccgcagccagctgacccgctggactccggaccgg
ctggcccgggccttcgagttactggtggaggcggaaacggactgcaagacaacaggactg
cccgccgaaacggtttgtcggcggaccctcatgcgaatcgcacaagcgggccgacgataa
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