Magnetospira sp. QH-2: MGMAQ_3924
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Entry
MGMAQ_3924 CDS
T03795
Symbol
pnp
Name
(GenBank) Polynucleotide phosphorylase (PNPase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
magq
Magnetospira sp. QH-2
Pathway
magq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
magq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGMAQ_3924 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
magq03019
]
MGMAQ_3924 (pnp)
03016 Transfer RNA biogenesis [BR:
magq03016
]
MGMAQ_3924 (pnp)
Enzymes [BR:
magq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MGMAQ_3924 (pnp)
Messenger RNA biogenesis [BR:
magq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MGMAQ_3924 (pnp)
Transfer RNA biogenesis [BR:
magq03016
]
Prokaryotic type
tRNA degradation factors
MGMAQ_3924 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
CCQ75723
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All DBs
Position
4002719..4004857
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AA seq
712 aa
AA seq
DB search
MFTEFRKEIDWGGRKLVLETGRIARQADGCVMVTYGETKVLCTAVAEKSVRPGIDFFPLT
VHYQEKTFAAGKIPGGFFKREGRPSEKEVLTSRLIDRPIRPLFAKGFKNETQVVCTVMAH
DMENDPDIASLVGASAALTLSGVPFLGPIGAARIGLIEGAYVLNPTMEQLADSKLDLIMA
GTMEGVLMVESEASELSEDDMLGAVTFGHENCQPVIKAIIELAEACAKEPMDLPQPPEGL
DELTARVTEMAEKDLRLAYGETIKLARQDKVQAVKDRVTQELSGDDSVNMDLVGGIFKKL
EQKIVRRDILKTGTRIDGRDTKTVRPIVSQVGVLPRAHGSALFTRGETQALVVTTLGTGQ
DEQIIDALEGEFRRNFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAINPLMPAKEN
FPYTVRVVSEITESNGSSSMATVCGTSLALMDAGVPLGRPVAGIAMGLIKEEDGVAVLSD
IIGDEDHLGDMDFKVAGTEEGITSLQMDIKITSITEDIMRTALAQAKDGRLHILGEMGHA
LNSSRDDVADTAPRITTMKVKADKIREIIGPGGKMIREISETSGARIDLDDDGTVKIAAA
DQAATDKAMAMIEAIAAEPEVGRIYRGKVVKVVDFGAFVNYLGPRDGLVHISQMADHRVA
KVTDVVSEGDEIWVKLIGIDDRGKVKLSMKLVDQETGEPREPEDTRKKDDEG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcacagaatttagaaaagaaattgactggggagggcgcaagctcgtcctggaaacc
gggcgcatcgcccgtcaggccgacggctgtgtcatggtcacctatggcgagaccaaggtg
ctttgcaccgcggtcgccgaaaagagtgtccgccccggaatcgatttctttccgctgacc
gtccactaccaggaaaagacctttgccgcggggaagatcccggggggctttttcaagcgc
gaaggccgtccgtccgaaaaggaggttctgacctcccgcctgatcgatcgtccgatccgt
ccgttgtttgccaagggcttcaagaacgagacccaggtggtctgcaccgtgatggcccat
gacatggaaaacgatccggacatcgcttccctggttggcgcttccgccgccttgaccctg
tccggcgtgccgttcctcggccccatcggcgcggctcgcattggcctgatcgaaggcgcc
tatgtgctcaacccgaccatggaacaattggctgattccaagctcgacctgatcatggcc
gggaccatggaaggcgtgctgatggtcgaatccgaggcttccgagctgagcgaagacgat
atgctcggcgccgtgactttcggtcacgagaattgccagccggtgatcaaggcgatcatc
gaactggccgaagcctgtgccaaggagcccatggatctgccgcagccgccggaaggcctc
gacgagctgaccgcccgggtcaccgaaatggccgaaaaagacctgcgtctggcctatggc
gagaccatcaagctggcccgtcaggacaaggtgcaagcggtcaaggaccgggtcacccag
gaattatccggcgacgatagcgtcaacatggatctggtcggcggtattttcaaaaagctc
gaacagaaaatcgtccgtcgcgacatcctcaagaccggcacccgcatcgacggtcgcgat
accaagaccgtgcgtccgatcgtctcgcaagtgggcgtgctgccccgggcccatggctcg
gcgctgttcacccgtggcgagacccaggccctggtggtcaccaccctgggtactggccag
gacgagcagatcattgatgccctggaaggcgaattccgccgcaacttcatgctgcactac
aacttcccgccctactccgtgggcgagaccggtcgcatggggtccccgggccgtcgtgaa
atcggtcacggcaagctggcctggcgggcgatcaatccgctgatgccggccaaggagaac
ttcccctatacggtccgcgtggtctccgagatcaccgagtccaatgggtcttcctccatg
gcgaccgtttgcggcacctctttggctttgatggatgccggtgtgcccctgggccgtccg
gtggccggtattgccatgggcttgatcaaggaagaagacggcgtggccgtgctttccgac
atcatcggtgacgaagatcacctgggtgacatggacttcaaggtggccgggaccgaggag
ggcatcacctccttgcagatggacatcaagatcacctccatcaccgaggacatcatgcgt
accgccctggcccaggccaaggacggtcggttgcatatacttggcgagatgggccatgcc
ctgaattcgtcgcgtgatgacgtggccgataccgccccgcggatcaccaccatgaaggtg
aaggccgacaagatccgcgagatcatcggcccgggtggcaagatgattcgcgagatctcg
gagaccagcggtgcccgcatcgatctggacgacgacggtacggtgaaaatcgccgccgcc
gaccaggccgccaccgataaggccatggcgatgatcgaagccattgccgccgagccggaa
gtcggccggatctatcgtggcaaggtggtcaaggttgttgatttcggcgctttcgtgaac
tatctgggcccgcgcgacggtctggtgcatatcagccagatggccgatcatcgcgtcgcc
aaggtgaccgatgtggtcagcgaaggcgacgagatctgggtcaagctgatcggcatcgac
gatcgcggcaaggtcaagctgtccatgaagctggtggatcaggaaaccggtgagccgcgc
gagccggaagacacgcgtaaaaaggatgacgagggctaa
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