Magnetospirillum sp. XM-1: XM1_0319
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Entry
XM1_0319 CDS
T04231
Name
(GenBank) DNA polymerase III, gamma/tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx03030
DNA replication
magx03430
Mismatch repair
magx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XM1_0319
03430 Mismatch repair
XM1_0319
03440 Homologous recombination
XM1_0319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
magx03032
]
XM1_0319
03400 DNA repair and recombination proteins [BR:
magx03400
]
XM1_0319
Enzymes [BR:
magx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XM1_0319
DNA replication proteins [BR:
magx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XM1_0319
DNA repair and recombination proteins [BR:
magx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XM1_0319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_19
AAA_18
ResIII
AAA_assoc_2
DUF6087
nSTAND3
TsaE
AAA_2
DUF815
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CUW37388
LinkDB
All DBs
Position
I:317209..319011
Genome browser
AA seq
600 aa
AA seq
DB search
MSETPAPTPYRVLARKYRPTDFAGLIGQEAMVRTLSNAIKTGRLAHAFVLTGVRGVGKTT
TARIIARALNCVGPDGKGGPTIDPCGTCEHCRAIAEDRHVDILEMDAASRTGVNDIREII
EGVRYRPTSARFKVYIIDEVHMLSTAAFNALLKTLEEPPEHVKFVFATTEIRKIPVTVLS
RCQRFDLRRVEMEVLAKHFEGIAAKEQAEIAPAALKLIARAADGSVRDGLSLLDQAISHG
AGAVTEAQVRDMLGLADRARVFDLLDAIMKGDVPTALDQITDQYAAGADPAVVLQDMLEL
VHWLTRLKVTPDAADQLGASETERVKGAEMAKALSLAALTRAWQMLLKGLGETRNAPNPL
QAAEMAVVRLAYAAELPSPAELVEQLRANPPPPPAPRGPGGGGGGGGFAGGGGGADAVSG
HHVGGGPVHGPATALKLQPAPVAETVILPAMPPDFAAVVALFTERREGLIAVQLRTQVNL
VSFAAGRIEWRQNGAAGSDLAPKTARLLSEWTGRRWTVSVNSTDPAQPTLAEQETNAELR
RRADAAEHPLVKAVLAAFPGASIEAVRDLGTEEDLLPAPAPVDDPEAIADDELIPGEEDL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacccccgcccccacgccctatcgcgtcctggcccgcaagtaccggcccacc
gacttcgccggtctgatcgggcaggaggccatggtccgcacgctgtcgaacgccatcaag
accggccgcctcgcccatgccttcgtgctgaccggcgtgcgcggcgtgggcaagaccacc
acggcacgcatcatcgcccgggcgctgaactgcgtcggaccggacggcaagggtggcccc
accatcgacccctgcggcacgtgcgagcactgccgcgccatcgccgaggaccgccacgtc
gatatcctggagatggacgccgccagccgcaccggcgtcaacgacatccgcgagatcatc
gagggcgtgcgctaccgccccacttcggcgcgcttcaaggtctacatcatcgacgaggtc
cacatgctgtccacggcggcgttcaacgcgctgctgaagacactggaggagccgccggaa
cacgtgaagttcgtgttcgccaccaccgagatccgcaagatccccgtcaccgtgctgtcg
cgctgccagcgcttcgacctgcgccgcgtcgagatggaggtgctggccaagcatttcgag
ggcatcgccgccaaggaacaggccgagatcgcgccggcggcgctgaaactgatcgcgcgc
gccgccgacggctcggtccgtgacggcctgtcgctgttggatcaggccatcagccatggg
gccggcgcggtgaccgaggcccaggtgcgcgacatgctgggcctggccgaccgcgcccgg
gtcttcgatcttctggacgccatcatgaagggcgacgtgcccaccgcgctggaccagatc
accgaccagtacgccgccggcgccgatccggcggtggtgctccaagacatgctggagctg
gtccactggctgacccgcctcaaggtcacccccgacgccgccgaccagctgggcgcgtcc
gagaccgagcgggtcaagggtgccgagatggccaaggccctgtcgctggccgcgctgacg
cgggcctggcagatgctgctgaaaggcctgggcgagacccgcaacgcccccaaccccctg
caggccgccgagatggcggtggtgcgcctggcctatgccgccgaactgcccagtccggcc
gaactggtggagcaattgcgcgccaatccgcccccgccccccgccccgcgcggccccggc
ggcggcggcggcggcggcggctttgctggcggcggcggcggagccgatgccgtctccggc
catcatgtgggcggcggaccggtgcatggcccggccaccgcgctgaagcttcagccggcg
cccgtcgccgagacggtgatcctgcccgccatgcctcccgacttcgcggcggtggtggcg
ctgttcaccgaacgccgcgaaggcctgatcgccgtgcagttgcgcacccaggtcaatctg
gtctccttcgccgccggccgtatcgaatggcggcagaacggcgccgccggctccgacctg
gcgcccaagacggcgcggctgctgtcggaatggaccggccggcgctggacggtgtcggtc
aactccaccgacccggcccagccgaccctggccgagcaggaaaccaacgccgaattgcgc
cgccgcgccgacgccgccgagcacccgctggtcaaggcggtgctggccgccttccccggc
gccagcatcgaggcggtgcgcgacttagggaccgaagaggatctgctgcccgccccggcg
ccggtagacgaccccgaggcgatcgccgacgacgaactgatccctggagaggaagatcta
tga
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