Magnetospirillum sp. XM-1: XM1_0333
Help
Entry
XM1_0333 CDS
T04231
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
magx
Magnetospirillum sp. XM-1
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
magx03016
]
XM1_0333 (truB)
Enzymes [BR:
magx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XM1_0333 (truB)
Transfer RNA biogenesis [BR:
magx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XM1_0333 (truB)
Prokaryotic type
XM1_0333 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CUW37402
UniProt:
A0A0U5MBR8
LinkDB
All DBs
Position
I:331333..332268
Genome browser
AA seq
311 aa
AA seq
DB search
MARKRKGDPVHGWLAIDKPLGLGSTQVVSRVKRILNAAKVGHGGTLDPLASGVLPIALGE
ATKTVQYVMDGAKTYRFQVRWGEATASCDKEGEVTETSPNRPTEEAIHAAIPAFLGEIDQ
IPPAFSAIKIDGQRAYDLARAGEEVEIKPRRIAIHSLALLGRPDEDHADFEVHCGKGTYV
RSLARDLALALGTVGHVSVLRRVACGPFTEQNAISLESLEDLSQVPAPWTFLLPIETALD
DIPALALTESEARRLQSGNPVAVMHVVSRHPQAELAEGTLCRAMQAERLVALVRIESGEI
RPVRVMNLTDE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgcaaacggaaaggcgatcccgttcacggctggctggccatcgacaagccctta
ggcctcggctccacccaggtggtgtcccgggtcaagcgcatcctgaacgccgccaaggtc
ggccatggcggcacgctcgacccgctggcgtcgggcgtgctgcccatcgcgctgggcgag
gccaccaagacggtgcaatacgtcatggacggggccaagacctaccgcttccaggtacgc
tggggcgaggcgaccgccagttgcgacaaggaaggcgaggtgacggaaacatcgcccaac
cgcccgaccgaggaggccatccacgccgccatccccgccttcctgggcgagatcgaccag
atcccgccggccttctccgccatcaagatcgacggccagcgcgcctacgacctggcccgc
gccggcgaggaggtggagatcaagccgcggcgcatcgccatccattcgctcgccctgctg
ggccgccccgacgaagaccacgccgatttcgaggtccattgcggcaagggcacctatgtg
cgctcgctggcccgcgacctcgctttggctctcggcacggtggggcatgtctcggtgctg
cggcgcgtggcctgcggcccgtttactgagcaaaacgcgatttcccttgaatccctggag
gacttgagtcaagttcccgccccttggacctttctgcttcccatcgagaccgcgctggac
gacatcccggccctggccctgacggaaagcgaggcccgccgcctccagagcggtaatccc
gtcgcagtgatgcacgtggtttcccggcatccgcaggctgaactcgccgaaggcacattg
tgccgggcgatgcaggcagagcggctggtggcgttggttcgcatcgaaagcggcgaaatc
cgcccggtgcgggtcatgaatctcaccgatgaatag
DBGET
integrated database retrieval system
