Magnetospirillum sp. XM-1: XM1_0364
Help
Entry
XM1_0364 CDS
T04231
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XM1_0364 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
magx03019
]
XM1_0364 (recQ)
03400 DNA repair and recombination proteins [BR:
magx03400
]
XM1_0364 (recQ)
Enzymes [BR:
magx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XM1_0364 (recQ)
Messenger RNA biogenesis [BR:
magx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XM1_0364 (recQ)
DNA repair and recombination proteins [BR:
magx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XM1_0364 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CUW37433
UniProt:
A0A0U5HV21
LinkDB
All DBs
Position
I:complement(360690..362516)
Genome browser
AA seq
608 aa
AA seq
DB search
MPAPLHVLNHVFGFPNFRGQQEEVIRHVVEGGDALVLMPTGAGKSLCYQVPALCRDGVAV
VVSPLIALMQNQVEALNQLGVRAAALNSARSLDEVRVIERRMQAGELDLVYVAPERLVLP
GFLSLLEDCRIALFAIDEAHCVSQWGHDFRPEYLQLALLHERFPRIPRIALTATADGPTR
RDIAERLNPQDGRHFVAGFDRPNIRYRIAAKNNAREQLLRFLEAEHGGKGAESGIVYCLS
RAKVEETASWLAGKGYTALAYHAGLDQDRRAANQERFLREEGIVMVATIAFGMGIDKPDV
RFVAHLDLPKSLEAYYQETGRAGRDGQPADAWMAYGLEDVAKLGQFIASSQASDAQKRVE
WAKLNALLGLCETTRCRRQVLLEYFGETGAPPCGNCDTCLDPVASFDGTELARKALSCVY
RTGESFGAGHVIDVLLGKDNEKIRRFGHERLSTYGIGTELPAEQWRSVLRQLVAAGMLAI
DTEGHGAFKLTEACRPLLRGEIRIDLRRDPLPAKGKSKASSAKKSAVALTDPADEALFQH
LRAERLALAKAQGVPPYVIWHDSTLVDIARRRPRHADELDGVAGLGEAKRERYGQILLDA
VAAFEARE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcccctgcacgtcctcaaccacgtcttcggctttcccaacttccgcggccag
caggaggaggtgatccgccatgtggtggagggcggcgacgccctggtgctgatgcctacg
ggtgcgggcaagtcgctgtgctatcaggtgccggcgctgtgccgcgacggggtggcggtg
gtggtctcgccgctgatcgccctgatgcagaatcaggtggaggccctgaaccagctgggc
gtgcgcgccgccgcgctgaactcggcgcgcagcctggacgaggtccgcgtcatcgagcgc
cgcatgcaggcgggagagctggatctggtctacgtggcgcccgagcgtctggtgctgccc
ggcttcctctccctgctcgaagactgccgcatcgccctgttcgccatcgacgaggcccat
tgcgtgtcgcaatgggggcatgatttccgtccggaatacctgcagctggccctgctgcac
gagcgcttccccaggattccgcgcatcgcgctcaccgccaccgccgacgggccgacccgc
cgggatatcgccgagcgcctgaaccctcaggacgggcggcacttcgtcgccggcttcgac
cggcccaacatccgctaccgcatcgccgccaagaacaacgcccgcgagcagctgttgcgc
ttcctcgaggccgagcacggcgggaagggggcggaatcgggcatcgtctactgcctgtcg
cgggccaaggtggaggagacggcctcctggctggcgggcaagggctatacggcgcttgcc
tatcacgccggcctcgaccaggacaggcgcgccgccaaccaggagcgcttcctgcgcgaa
gagggcatcgtcatggtggcgaccatcgcgttcggcatgggcatcgacaagcccgacgtg
cgcttcgtcgcccatctcgacctgcccaagagcctggaggcctattaccaggaaacgggg
cgcgccgggcgcgacgggcagcccgccgacgcctggatggcctatggcctggaggacgtg
gccaagctgggccagttcatcgcctcgagccaggcctcggatgcccagaagcgcgtcgaa
tgggccaagctcaacgccctcttgggcctgtgcgagaccacccgctgccgccgccaggtg
ctgctggagtatttcggcgagaccggcgcgccgccttgcggcaattgcgacacctgcctc
gatccggtggcttccttcgacggcaccgagctggccaggaaggcattgtcctgcgtctac
cgcaccggcgagagcttcggggccggccacgtcatcgacgtgctgctgggcaaggacaac
gagaagatccgccgcttcggccacgaacgcctcagcacctacggcatcggcaccgaactg
ccggccgagcaatggcgttcggtgctccgccaattggtggccgccggcatgctcgccatc
gataccgagggccacggcgccttcaagctgaccgaggcctgccgtccgctgctgcgcggc
gaaatccgcatcgacctgcgccgcgatcccttgccggccaagggcaagtccaaggcgtcc
tcggccaagaaatccgccgtcgccctcaccgaccccgccgacgaggccctgttccagcat
ctgcgggccgagcgcctggccctggccaaggcccagggggtgccaccctacgtcatctgg
cacgattccaccctggtggacatcgcccgccgccgtccccgccacgcggacgagctcgac
ggcgtcgccggcctgggcgaggccaagcgcgagcgctacggccagatcctgttggacgcg
gtggcggcgttcgaggcgcgggaatag
DBGET
integrated database retrieval system
